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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107927472   zinc finger BED domain-containing protein RICESLEEPER 1 
 ghi-r.1   107902745   uncharacterized LOC107902745 
 ghi-r.1   107943687   zinc finger BED domain-containing protein RICESLEEPER 1 
 ghi-r.1   107943691   uncharacterized LOC107943691 

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Top 50 coexpressed genes to 107927472 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107927472 (ghi-r.1 coexpression data)

CoexMap"107927472"


ghiLOC107927472 | Entrez gene ID : 107927472    
Species ghi gma zma sbi sly cit ath nta tae mtr osa hvu bna bdi vvi bra sot cre ppo
Paralog 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009938 [list] [network] negative regulation of gibberellic acid mediated signaling pathway  (13 genes)  IEA  
GO:0010187 [list] [network] negative regulation of seed germination  (13 genes)  IEA  
GO:0042538 [list] [network] hyperosmotic salinity response  (13 genes)  IEA  
GO:2000033 [list] [network] regulation of seed dormancy process  (13 genes)  IEA  
GO:2000377 [list] [network] regulation of reactive oxygen species metabolic process  (18 genes)  IEA  
GO:0009867 [list] [network] jasmonic acid mediated signaling pathway  (19 genes)  IEA  
GO:0009863 [list] [network] salicylic acid mediated signaling pathway  (26 genes)  IEA  
GO:0009737 [list] [network] response to abscisic acid  (186 genes)  IEA  
GO:0009723 [list] [network] response to ethylene  (233 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016714024.2 [sequence] [blastp]
XP_040943872.1 [sequence] [blastp]
XP_040943874.1 [sequence] [blastp]
XP_040943877.1 [sequence] [blastp]
XP_040943881.1 [sequence] [blastp]
XP_040943883.1 [sequence] [blastp]
XP_040943887.1 [sequence] [blastp]
XP_040943891.1 [sequence] [blastp]
XP_040943898.1 [sequence] [blastp]
XP_040943903.1 [sequence] [blastp]
XP_040943909.1 [sequence] [blastp]
XP_040943916.1 [sequence] [blastp]
XP_040943923.1 [sequence] [blastp]
XP_040943926.1 [sequence] [blastp]
XP_040943928.1 [sequence] [blastp]
XP_040943929.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cyto_E.R. 3,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_016714024.2)
cyto 5,  cyto_E.R. 3,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_040943872.1)
cyto 5,  cyto_E.R. 3,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_040943874.1)
cyto 5,  cyto_E.R. 3,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_040943877.1)
cyto 5,  cyto_E.R. 3,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_040943881.1)
cyto 5,  cyto_E.R. 3,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_040943883.1)
cyto 5,  cyto_E.R. 3,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_040943887.1)
cyto 5,  cyto_E.R. 3,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_040943891.1)
cyto 6,  nucl 4  (predict for XP_040943898.1)
cyto 6,  nucl 4  (predict for XP_040943903.1)
cyto 6,  nucl 4  (predict for XP_040943909.1)
cyto 6,  nucl 4  (predict for XP_040943916.1)
cyto 5,  nucl 4  (predict for XP_040943923.1)
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_040943926.1)
cyto 6,  nucl 2,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_040943928.1)
cyto 6,  nucl 1,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_040943929.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016714024.2)
other 8  (predict for XP_040943872.1)
other 8  (predict for XP_040943874.1)
other 8  (predict for XP_040943877.1)
other 8  (predict for XP_040943881.1)
other 8  (predict for XP_040943883.1)
other 8  (predict for XP_040943887.1)
other 8  (predict for XP_040943891.1)
other 8  (predict for XP_040943898.1)
other 8  (predict for XP_040943903.1)
other 8  (predict for XP_040943909.1)
other 8  (predict for XP_040943916.1)
other 7  (predict for XP_040943923.1)
other 7  (predict for XP_040943926.1)
other 8  (predict for XP_040943928.1)
other 8  (predict for XP_040943929.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107927472
ghi-r.1
for
107902745
ghi-r.1
for
107943687
ghi-r.1
for
107943691


Ortholog ID: 6780
Species ghi ghi
Symbol LOC107943687 LOC107943691
Function* zinc finger BED domain-containing protein RICESLEEPER 1 uncharacterized LOC107943691
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern
Entrez Gene ID* 107943687 107943691
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