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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107928366   zinc finger BED domain-containing protein RICESLEEPER 1 
 ghi-r.1   107959675   zinc finger BED domain-containing protein RICESLEEPER 2 
 ghi-r.1   107885945   zinc finger BED domain-containing protein RICESLEEPER 1 
 bra-r.6   103831544   zinc finger BED domain-containing protein RICESLEEPER 1 
 bra-r.6   103841788   zinc finger BED domain-containing protein RICESLEEPER 1 
 bna-r.1   106382559   zinc finger BED domain-containing protein RICESLEEPER 1-like 
 bna-r.1   111198491   zinc finger BED domain-containing protein RICESLEEPER 1 
 bna-r.1   106349262   zinc finger BED domain-containing protein RICESLEEPER 1 
 cit-r.1   107178781   zinc finger BED domain-containing protein DAYSLEEPER-like 
 gma-u.5   106797150   zinc finger BED domain-containing protein RICESLEEPER 2 
 vvi-u.5   104877478   zinc finger BED domain-containing protein RICESLEEPER 1 
 ppo-u.5   18095414   zinc finger BED domain-containing protein RICESLEEPER 1 
 ppo-u.5   18103335   zinc finger BED domain-containing protein RICESLEEPER 1 
 mtr-u.5   112418138   zinc finger BED domain-containing protein RICESLEEPER 2 
 mtr-u.5   112419216   zinc finger BED domain-containing protein RICESLEEPER 2-like 
 sly-u.5   104649474   zinc finger BED domain-containing protein RICESLEEPER 1-like 
 sly-u.5   104649469   zinc finger BED domain-containing protein RICESLEEPER 1-like 
 sot-r.1   107063359   zinc finger BED domain-containing protein RICESLEEPER 2-like 
 sot-r.1   107063165   zinc finger BED domain-containing protein RICESLEEPER 1-like 
 sot-r.1   107063162   zinc finger BED domain-containing protein RICESLEEPER 1-like 
 nta-r.1   142168879   zinc finger BED domain-containing protein RICESLEEPER 2-like 
 nta-r.1   142178382   zinc finger BED domain-containing protein RICESLEEPER 2-like 
 nta-r.1   142178361   zinc finger BED domain-containing protein RICESLEEPER 2-like 
 osa-u.5   4337531   protein NEN4 
 zma-u.5   109943047   zinc finger BED domain-containing protein RICESLEEPER 2-like 
 zma-u.5   109939444   zinc finger BED domain-containing protein RICESLEEPER 2 
 tae-r.2   123061787   zinc finger BED domain-containing protein RICESLEEPER 2 
 hvu-r.1   123444208   zinc finger BED domain-containing protein RICESLEEPER 2-like 
 sbi-r.1   8057560   zinc finger BED domain-containing protein RICESLEEPER 2 
 bdi-r.1   104582851   zinc finger BED domain-containing protein RICESLEEPER 2 

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Top 50 coexpressed genes to 107928366 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107928366 (ghi-r.1 coexpression data)

CoexMap"107928366"


ghiLOC107928366 | Entrez gene ID : 107928366    
Species ghi bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre ath
Paralog 3 2 3 1 1 1 2 2 2 3 3 1 2 1 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_016715063.2 [sequence] [blastp]
XP_016715064.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016715063.2)
nucl 7,  cyto 1,  chlo 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016715064.2)
Subcellular
localization
TargetP
other 6  (predict for XP_016715063.2)
other 6  (predict for XP_016715064.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107928366
ghi-r.1
for
107959675
ghi-r.1
for
107885945
bra-r.6
for
103831544
bra-r.6
for
103841788
bna-r.1
for
106382559
bna-r.1
for
111198491
bna-r.1
for
106349262
cit-r.1
for
107178781
gma-u.5
for
106797150
vvi-u.5
for
104877478
ppo-u.5
for
18095414
ppo-u.5
for
18103335
mtr-u.5
for
112418138
mtr-u.5
for
112419216
sly-u.5
for
104649474
sly-u.5
for
104649469
sot-r.1
for
107063359
sot-r.1
for
107063165
sot-r.1
for
107063162
nta-r.1
for
142168879
nta-r.1
for
142178382
nta-r.1
for
142178361
osa-u.5
for
4337531
zma-u.5
for
109943047
zma-u.5
for
109939444
tae-r.2
for
123061787
hvu-r.1
for
123444208
sbi-r.1
for
8057560
bdi-r.1
for
104582851


Ortholog ID: 761
Species ghi ghi ghi bra bra bna bna bna cit cit gma vvi vvi ppo ppo mtr mtr sly sly sot sot sot nta nta nta zma tae tae hvu bdi
Symbol LOC107928366 LOC107959675 LOC107885945 LOC103831544 LOC103841788 LOC111198491 LOC106349262 LOC106347222 LOC107178781 LOC127902262 LOC106796315 LOC104877478 LOC104880811 LOC18095414 LOC18103335 LOC112418138 LOC112418369 LOC104649474 LOC104649469 LOC107063359 LOC107063165 LOC107063162 LOC142168879 LOC107819818 LOC107794726 LOC109943047 LOC123190787 LOC123070464 LOC123444208 LOC104582851
Function* zinc finger BED domain-containing protein RICESLEEPER 1 zinc finger BED domain-containing protein RICESLEEPER 2 zinc finger BED domain-containing protein RICESLEEPER 1 zinc finger BED domain-containing protein RICESLEEPER 1 zinc finger BED domain-containing protein RICESLEEPER 1 zinc finger BED domain-containing protein RICESLEEPER 1 zinc finger BED domain-containing protein RICESLEEPER 1 zinc finger BED domain-containing protein RICESLEEPER 1-like zinc finger BED domain-containing protein DAYSLEEPER-like zinc finger BED domain-containing protein RICESLEEPER 2-like zinc finger BED domain-containing protein RICESLEEPER 1 zinc finger BED domain-containing protein RICESLEEPER 1 zinc finger BED domain-containing protein RICESLEEPER 1 zinc finger BED domain-containing protein RICESLEEPER 1 zinc finger BED domain-containing protein RICESLEEPER 1 zinc finger BED domain-containing protein RICESLEEPER 2 zinc finger BED domain-containing protein RICESLEEPER 1 zinc finger BED domain-containing protein RICESLEEPER 1-like zinc finger BED domain-containing protein RICESLEEPER 1-like zinc finger BED domain-containing protein RICESLEEPER 2-like zinc finger BED domain-containing protein RICESLEEPER 1-like zinc finger BED domain-containing protein RICESLEEPER 1-like zinc finger BED domain-containing protein RICESLEEPER 2-like zinc finger BED domain-containing protein RICESLEEPER 1-like zinc finger BED domain-containing protein RICESLEEPER 3-like zinc finger BED domain-containing protein RICESLEEPER 2-like zinc finger BED domain-containing protein RICESLEEPER 2 zinc finger BED domain-containing protein RICESLEEPER 2 zinc finger BED domain-containing protein RICESLEEPER 2-like zinc finger BED domain-containing protein RICESLEEPER 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 8
bna04141 Protein processing in endoplasmic reticulum 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 8
bna03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107928366 107959675 107885945 103831544 103841788 111198491 106349262 106347222 107178781 127902262 106796315 104877478 104880811 18095414 18103335 112418138 112418369 104649474 104649469 107063359 107063165 107063162 142168879 107819818 107794726 109943047 123190787 123070464 123444208 104582851
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