ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107928523	FRIGIDA-like protein 4a
ath-u.5	AT3G22440	FRIGIDA-like protein
ath-u.5	AT4G14900	FRIGIDA-like protein
gma-u.5	100805780	FRIGIDA-like protein 4a
gma-u.5	100779694	FRIGIDA-like protein 4a
vvi-u.5	100249314	FRIGIDA-like protein 4a
ppo-u.5	7467492	FRIGIDA-like protein 4a
mtr-u.5	25485207	FRIGIDA-like protein 4a
sly-u.5	101252327	FRIGIDA-like protein 4a
osa-u.5	4342522	FRIGIDA-like protein 4a
zma-u.5	100279445	uncharacterized LOC100279445
zma-u.5	103631993	FRIGIDA-like protein 4a

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016715257.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 2, plas 2, cysk_nucl 1, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1

(predict for XP_016715257.1)

Subcellular
localization
TargetP

other 8

(predict for XP_016715257.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107928523	ath-u.5 for AT3G22440	ath-u.5 for AT4G14900	gma-u.5 for 100805780	gma-u.5 for 100779694	vvi-u.5 for 100249314	ppo-u.5 for 7467492	mtr-u.5 for 25485207	sly-u.5 for 101252327	osa-u.5 for 4342522	zma-u.5 for 100279445	zma-u.5 for 103631993

Ortholog ID: 10108

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

hvu

sbi

bdi

Symbol

Function^*

FRIGIDA-like protein 4a

FRIGIDA-like protein

FRIGIDA-like protein 4a

uncharacterized LOC100279445

FRIGIDA-like protein 4a

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	2
ath03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2
gma03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03022	Basal transcription factors	2
gma03083	Polycomb repressive complex	2
gma00500	Starch and sucrose metabolism	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2
sly04075	Plant hormone signal transduction	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3
sbi03022	Basal transcription factors	2

Expression

Expression pattern

Entrez Gene ID^*

107942677

121221027

827147

821815

103834532

111210545

106453944

102629518

100805780

100779694

100249314

7467492

25485207

101252327

102579372

107784774

107791044

4342522

103631993

100279445

123452665

8060713

100845864

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107928523 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107928523 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	sot	nta	cre	tae
Paralog	1	2	2	1	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107928523 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107928523 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**