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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107928797   ethylene-responsive transcription factor ERF053 
 ath-u.5   ERF53   Integrase-type DNA-binding superfamily protein 
 ath-u.5   AT4G28140   Integrase-type DNA-binding superfamily protein 
 gma-u.5   100811328   ethylene-responsive transcription factor ERF054 
 gma-u.5   100801882   ethylene-responsive transcription factor ERF054 
 gma-u.5   100809887   ethylene-responsive transcription factor ERF053 
 vvi-u.5   100246593   ethylene-responsive transcription factor ERF054 
 vvi-u.5   104877562   uncharacterized LOC104877562 
 ppo-u.5   18108574   ethylene-responsive transcription factor ERF054 
 ppo-u.5   7494418   ethylene-responsive transcription factor ERF062 
 mtr-u.5   25487633   ethylene-responsive transcription factor ERF053 
 sly-u.5   101264838   ethylene-responsive transcription factor ERF054 
 osa-u.5   9268771   ethylene-responsive transcription factor ERF054 
 osa-u.5   4336472   ethylene-responsive transcription factor ERF054 

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Top 50 coexpressed genes to 107928797 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107928797 (ghi-r.1 coexpression data)

CoexMap"107928797"


ghiLOC107928797 | Entrez gene ID : 107928797    
Species ghi ath gma vvi ppo mtr sly osa bdi hvu bra cit bna sbi sot nta cre tae zma
Paralog 1 2 3 2 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016715556.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016715556.2)
Subcellular
localization
TargetP
other 9  (predict for XP_016715556.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107928797
ath-u.5
for
ERF53
ath-u.5
for
AT4G28140
gma-u.5
for
100811328
gma-u.5
for
100801882
gma-u.5
for
100809887
vvi-u.5
for
100246593
vvi-u.5
for
104877562
ppo-u.5
for
18108574
ppo-u.5
for
7494418
mtr-u.5
for
25487633
sly-u.5
for
101264838
osa-u.5
for
9268771
osa-u.5
for
4336472


Ortholog ID: 3079
Species ghi ghi ath ath bra cit gma gma vvi vvi ppo ppo mtr sly sot nta osa osa tae hvu hvu sbi sbi bdi bdi
Symbol LOC121213704 LOC121228106 AT4G28140 ERF53 LOC103842576 LOC102617350 DREB5 LOC100811328 LOC100246593 LOC104877562 LOC7494418 LOC18108574 LOC25487633 LOC101264838 LOC102599959 LOC107813905 LOC9268771 LOC4336472 LOC123127829 LOC123402585 LOC123430566 LOC8066201 LOC8056036 LOC100827069 LOC100830181
Function* ethylene-responsive transcription factor ERF054 ethylene-responsive transcription factor ERF054 Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein ethylene-responsive transcription factor ERF053 ethylene-responsive transcription factor ERF053 dehydration-responsive element binding protein 5 ethylene-responsive transcription factor ERF054 ethylene-responsive transcription factor ERF054 uncharacterized LOC104877562 ethylene-responsive transcription factor ERF062 ethylene-responsive transcription factor ERF054 ethylene-responsive transcription factor ERF053 ethylene-responsive transcription factor ERF054 ethylene-responsive transcription factor ERF054 ethylene-responsive transcription factor ERF054 ethylene-responsive transcription factor ERF054 ethylene-responsive transcription factor ERF054 ethylene-responsive transcription factor ERF054 ethylene-responsive transcription factor ERF054-like ethylene-responsive transcription factor ERF053-like ethylene-responsive transcription factor ERF053 dehydration-responsive element-binding protein 2B ethylene-responsive transcription factor ERF054 ethylene-responsive transcription factor ERF053
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00908 Zeatin biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
hvu00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 4
hvu00010 Glycolysis / Gluconeogenesis 3
hvu00710 Carbon fixation by Calvin cycle 3
hvu01230 Biosynthesis of amino acids 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04075 Plant hormone signal transduction 3
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 3
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121213704 121228106 828929 816622 103842576 102617350 100101898 100811328 100246593 104877562 7494418 18108574 25487633 101264838 102599959 107813905 9268771 4336472 123127829 123402585 123430566 8066201 8056036 100827069 100830181
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