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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107928825   transcription factor MYB73 
 ath-u.5   MYB77   myb domain protein 77 
 ath-u.5   MYBR1   myb domain protein r1 
 ath-u.5   MYB73   myb domain protein 73 
 gma-u.5   100806145   transcription factor MYB44 
 gma-u.5   100781727   transcription factor MYB77 
 gma-u.5   100802503   transcription factor MYB25 
 vvi-u.5   100267575   transcription factor MYB44 
 vvi-u.5   100250670   transcription factor MYB73 
 ppo-u.5   7476405   transcription factor MYB44 
 ppo-u.5   7483088   transcription factor MYB44 
 mtr-u.5   25493498   transcription factor MYB44 
 mtr-u.5   112422642   transcription factor MYB73 
 mtr-u.5   11410892   transcription factor MYB44 
 sly-u.5   101262913   transcription factor MYB73-like 
 sly-u.5   101244577   transcription factor MYB44 
 osa-u.5   4327813   transcription factor MYB44 
 osa-u.5   4341607   transcription factor MYB77 
 zma-u.5   100193529   Transcription factor MYB44 
 zma-u.5   100502222   uncharacterized LOC100502222 

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Top 50 coexpressed genes to 107928825 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107928825 (ghi-r.1 coexpression data)

CoexMap"107928825"


ghiLOC107928825 | Entrez gene ID : 107928825    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 3 3 2 2 3 2 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (605 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (729 genes)  IEA  
Protein XP_016715591.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 4  (predict for XP_016715591.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016715591.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107928825
ath-u.5
for
MYB77
ath-u.5
for
MYBR1
ath-u.5
for
MYB73
gma-u.5
for
100806145
gma-u.5
for
100781727
gma-u.5
for
100802503
vvi-u.5
for
100267575
vvi-u.5
for
100250670
ppo-u.5
for
7476405
ppo-u.5
for
7483088
mtr-u.5
for
25493498
mtr-u.5
for
112422642
mtr-u.5
for
11410892
sly-u.5
for
101262913
sly-u.5
for
101244577
osa-u.5
for
4327813
osa-u.5
for
4341607
zma-u.5
for
100193529
zma-u.5
for
100502222


Ortholog ID: 336
Species ghi ghi ath ath bra bra bna bna cit gma gma vvi ppo mtr mtr sly sly sot nta nta osa zma tae tae hvu sbi cre cre
Symbol LOC107941894 LOC107908876 MYBR1 MYB77 LOC103862529 LOC103829517 LOC111197725 LOC106409250 LOC102577976 LOC100806145 MYB112 LOC100250670 LOC18104834 LOC11434242 LOC11410892 LOC101262913 LOC101244577 LOC102582421 LOC107767835 LOC107820576 LOC4346379 LOC100284969 LOC780586 LOC123111468 LOC123410944 LOC8083495 CHLRE_09g399067v5 CHLRE_16g677382v5
Function* transcription factor MYB73 transcription factor MYB73 myb domain protein r1 myb domain protein 77 transcription factor MYB73 transcription factor MYB44 transcription factor MYB73 transcription factor MYB73 putative R2R3-MYB transcription factor transcription factor MYB44 MYB transcription factor MYB112 transcription factor MYB73 transcription factor MYB44 transcription factor MYB73 transcription factor MYB44 transcription factor MYB73-like transcription factor MYB44 transcription factor MYB44-like transcription factor MYB44-like transcription factor MYB44-like transcription factor MYB44 sucrose responsive element binding protein transcription factor MYB44 transcription factor MYB44 transcription factor MYB44-like transcription factor MYB44 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 3
bra04517 IgSF CAM signaling 3
bra04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 5
sly04075 Plant hormone signal transduction 3
sly04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 7
tae00941 Flavonoid biosynthesis 3
tae00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107941894 107908876 836865 824168 103862529 103829517 111197725 106409250 102577976 100806145 780556 100250670 18104834 11434242 11410892 101262913 101244577 102582421 107767835 107820576 4346379 100284969 780586 123111468 123410944 8083495 5720387 5724759
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