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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107928938   E3 ubiquitin ligase BIG BROTHER-related 
 ghi-r.1   107886888   E3 ubiquitin ligase BIG BROTHER-related 
 ghi-r.1   107900966   E3 ubiquitin ligase BIG BROTHER-related 
 ghi-r.1   107909027   E3 ubiquitin ligase BIG BROTHER-related 
 ath-u.5   AT3G19910   RING/U-box superfamily protein 
 bra-r.6   103869406   E3 ubiquitin ligase BIG BROTHER-related 
 bra-r.6   103836861   E3 ubiquitin ligase BIG BROTHER-related 
 bna-r.1   106346296   E3 ubiquitin ligase BIG BROTHER-related 
 bna-r.1   125608851   E3 ubiquitin ligase BIG BROTHER-related-like 
 bna-r.1   111215549   E3 ubiquitin ligase BIG BROTHER-related-like 
 cit-r.1   102627379   E3 ubiquitin ligase BIG BROTHER-related 
 gma-u.5   100306465   E3 ubiquitin ligase BIG BROTHER-related 
 gma-u.5   100787418   E3 ubiquitin ligase BIG BROTHER-related 
 vvi-u.5   100247631   E3 ubiquitin ligase BIG BROTHER-related 
 ppo-u.5   18099076   E3 ubiquitin ligase BIG BROTHER-related 
 ppo-u.5   7456304   E3 ubiquitin ligase BIG BROTHER-related 
 mtr-u.5   11445533   E3 ubiquitin ligase BIG BROTHER-related 
 sly-u.5   101249872   E3 ubiquitin ligase BIG BROTHER-related 
 sot-r.1   102601923   E3 ubiquitin ligase BIG BROTHER-related-like 
 nta-r.1   107809492   E3 ubiquitin ligase BIG BROTHER-related 
 nta-r.1   107814551   E3 ubiquitin ligase BIG BROTHER-related 
 osa-u.5   4346240   E3 ubiquitin ligase BIG BROTHER-related 
 osa-u.5   4347692   E3 ubiquitin ligase BIG BROTHER-related 
 zma-u.5   100284381   protein binding protein 
 zma-u.5   100193231   putative RING zinc finger domain superfamily protein 
 zma-u.5   100282919   uncharacterized LOC100282919 
 tae-r.2   123122033   E3 ubiquitin ligase BIG BROTHER-related 
 tae-r.2   123164419   E3 ubiquitin ligase BIG BROTHER-related 
 tae-r.2   123104578   E3 ubiquitin ligase BIG BROTHER-related 
 hvu-r.1   123410356   E3 ubiquitin ligase BIG BROTHER-related-like 
 hvu-r.1   123400118   E3 ubiquitin ligase BIG BROTHER-related-like 
 sbi-r.1   8058040   uncharacterized LOC8058040 
 sbi-r.1   8066938   E3 ubiquitin ligase BIG BROTHER-related 
 sbi-r.1   8058043   E3 ubiquitin ligase BIG BROTHER-related 
 bdi-r.1   100841356   E3 ubiquitin ligase BIG BROTHER-related 
 cre-r.1   CHLRE_10g442750v5   uncharacterized protein 

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Top 50 coexpressed genes to 107928938 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107928938 (ghi-r.1 coexpression data)

CoexMap"107928938"


ghiLOC107928938 | Entrez gene ID : 107928938    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 2 1 2 1 1 1 2 2 3 3 2 3 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016715736.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 2,  cyto 1,  vacu 1  (predict for XP_016715736.1)
Subcellular
localization
TargetP
other 6,  chlo 6  (predict for XP_016715736.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107928938
ghi-r.1
for
107886888
ghi-r.1
for
107900966
ghi-r.1
for
107909027
ath-u.5
for
AT3G19910
bra-r.6
for
103869406
bra-r.6
for
103836861
bna-r.1
for
106346296
bna-r.1
for
125608851
bna-r.1
for
111215549
cit-r.1
for
102627379
gma-u.5
for
100306465
gma-u.5
for
100787418
vvi-u.5
for
100247631
ppo-u.5
for
18099076
ppo-u.5
for
7456304
mtr-u.5
for
11445533
sly-u.5
for
101249872
sot-r.1
for
102601923
nta-r.1
for
107809492
nta-r.1
for
107814551
osa-u.5
for
4346240
osa-u.5
for
4347692
zma-u.5
for
100284381
zma-u.5
for
100193231
zma-u.5
for
100282919
tae-r.2
for
123122033
tae-r.2
for
123164419
tae-r.2
for
123104578
hvu-r.1
for
123410356
hvu-r.1
for
123400118
sbi-r.1
for
8058040
sbi-r.1
for
8066938
sbi-r.1
for
8058043
bdi-r.1
for
100841356
cre-r.1
for
CHLRE_10g442750v5


Ortholog ID: 4081
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi cre
Symbol LOC107928938 LOC107886888 LOC107900966 AT3G19910 LOC103869406 LOC103836861 LOC106346296 LOC125608851 LOC106352973 LOC102627379 LOC100306465 LOC100787418 LOC100247631 LOC18099076 LOC7456304 LOC11445533 LOC101249872 LOC102601923 LOC107809492 LOC107814551 LOC4346240 LOC4347692 LOC100284381 LOC100193231 LOC100282919 LOC123164419 LOC123104578 LOC123104267 LOC123410356 LOC123400118 LOC8058040 LOC8066938 LOC8058043 LOC100841356 CHLRE_10g442750v5
Function* E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related RING/U-box superfamily protein E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related-like E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related-like E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related protein binding protein putative RING zinc finger domain superfamily protein uncharacterized LOC100282919 E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related-like E3 ubiquitin ligase BIG BROTHER-related-like uncharacterized LOC8058040 E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related E3 ubiquitin ligase BIG BROTHER-related uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03082 ATP-dependent chromatin remodeling 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 2
bra03272 Virion - Hepatitis viruses 2
bra04144 Endocytosis 2
bra00564 Glycerophospholipid metabolism 2
bra00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
cit03008 Ribosome biogenesis in eukaryotes 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 3
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
sot03010 Ribosome 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00020 Citrate cycle (TCA cycle) 3
nta00640 Propanoate metabolism 3
nta01200 Carbon metabolism 3
nta00620 Pyruvate metabolism 2
nta00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00330 Arginine and proline metabolism 2
zma00410 beta-Alanine metabolism 2
zma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 4
zma04146 Peroxisome 2
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00460 Cyanoamino acid metabolism 2
sbi01200 Carbon metabolism 2
sbi00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107928938 107886888 107900966 821529 103869406 103836861 106346296 125608851 106352973 102627379 100306465 100787418 100247631 18099076 7456304 11445533 101249872 102601923 107809492 107814551 4346240 4347692 100284381 100193231 100282919 123164419 123104578 123104267 123410356 123400118 8058040 8066938 8058043 100841356 5716037
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