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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107929393   formyltetrahydrofolate deformylase 2, mitochondrial 
 ath-u.5   AT4G17360   Formyl transferase 
 ath-u.5   AT5G47435   formyltetrahydrofolate deformylase 
 gma-u.5   100809779   formyltetrahydrofolate deformylase 1, mitochondrial 
 gma-u.5   100791905   formyltetrahydrofolate deformylase 2, mitochondrial 
 vvi-u.5   100852627   formyltetrahydrofolate deformylase 1, mitochondrial 
 ppo-u.5   7461982   formyltetrahydrofolate deformylase 1, mitochondrial 
 ppo-u.5   18094609   formyltetrahydrofolate deformylase 1, mitochondrial 
 mtr-u.5   11428500   formyltetrahydrofolate deformylase 1, mitochondrial 
 mtr-u.5   11426938   formyltetrahydrofolate deformylase 1, mitochondrial 
 sly-u.5   101259867   formyltetrahydrofolate deformylase 2, mitochondrial 
 sly-u.5   101251299   formyltetrahydrofolate deformylase 1, mitochondrial-like 
 osa-u.5   4331294   formyltetrahydrofolate deformylase 2, mitochondrial 
 zma-u.5   100286111   formyltetrahydrofolate deformylase 

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Top 50 coexpressed genes to 107929393 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107929393 (ghi-r.1 coexpression data)

CoexMap"107929393"


ghiLOC107929393 | Entrez gene ID : 107929393    
Species ghi ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi cre bna nta bdi bra
Paralog 1 2 2 1 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00630 [list] [network] Glyoxylate and dicarboxylate metabolism (192 genes)
ghi00670 [list] [network] One carbon pool by folate (103 genes)
GO BP
GO:0006189 [list] [network] 'de novo' IMP biosynthetic process  (22 genes)  IEA  
GO CC
GO MF
GO:0008864 [list] [network] formyltetrahydrofolate deformylase activity  (4 genes)  IEA  
Protein XP_016716289.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_016716289.2)
Subcellular
localization
TargetP
mito 6,  chlo 3  (predict for XP_016716289.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107929393

.
ath-u.5
for
AT4G17360

.
ath-u.5
for
AT5G47435

.
gma-u.5
for
100809779

.
gma-u.5
for
100791905

.
vvi-u.5
for
100852627

.
ppo-u.5
for
7461982

.
ppo-u.5
for
18094609

.
mtr-u.5
for
11428500

.
mtr-u.5
for
11426938

.
sly-u.5
for
101259867

.
sly-u.5
for
101251299

.
osa-u.5
for
4331294

.
zma-u.5
for
100286111

.


Ortholog ID: 5144
Species ath ath gma gma sly sly osa zma bra bra vvi ppo ppo mtr mtr hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G17360 AT5G47435 LOC100809779 LOC100791905 LOC101259867 LOC101251299 LOC4331294 LOC100286111 LOC103868219 LOC103827649 LOC100852627 LOC18094609 LOC7461982 LOC11426938 LOC11428500 LOC123449992 LOC107929393 LOC107934095 LOC106402097 LOC106377282 CHLRE_10g430450v5 LOC8081560 LOC102590335 LOC102625349 LOC100844926 LOC107802892 LOC107770420
Function* Formyl transferase formyltetrahydrofolate deformylase formyltetrahydrofolate deformylase 1, mitochondrial formyltetrahydrofolate deformylase 2, mitochondrial formyltetrahydrofolate deformylase 2, mitochondrial formyltetrahydrofolate deformylase 1, mitochondrial-like formyltetrahydrofolate deformylase 2, mitochondrial formyltetrahydrofolate deformylase formyltetrahydrofolate deformylase 2, mitochondrial formyltetrahydrofolate deformylase 1, mitochondrial formyltetrahydrofolate deformylase 1, mitochondrial formyltetrahydrofolate deformylase 1, mitochondrial formyltetrahydrofolate deformylase 1, mitochondrial formyltetrahydrofolate deformylase 1, mitochondrial formyltetrahydrofolate deformylase 1, mitochondrial formyltetrahydrofolate deformylase 2, mitochondrial-like formyltetrahydrofolate deformylase 2, mitochondrial formyltetrahydrofolate deformylase 2, mitochondrial formyltetrahydrofolate deformylase 1, mitochondrial formyltetrahydrofolate deformylase 1, mitochondrial uncharacterized protein formyltetrahydrofolate deformylase 2, mitochondrial formyltetrahydrofolate deformylase 2, mitochondrial formyltetrahydrofolate deformylase 2, mitochondrial formyltetrahydrofolate deformylase 2, mitochondrial formyltetrahydrofolate deformylase 1, mitochondrial formyltetrahydrofolate deformylase 1, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 5
ath04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04517 IgSF CAM signaling 3
gma04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00630 Glyoxylate and dicarboxylate metabolism 5
sly00710 Carbon fixation by Calvin cycle 3
sly00260 Glycine, serine and threonine metabolism 3
sly00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01250 Biosynthesis of nucleotide sugars 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
ghi04148 Efferocytosis 2
ghi00062 Fatty acid elongation 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
ghi04148 Efferocytosis 2
ghi00062 Fatty acid elongation 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
bna03060 Protein export 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00250 Alanine, aspartate and glutamate metabolism 2
cre00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
bdi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 4
nta00260 Glycine, serine and threonine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 4
nta03010 Ribosome 4
nta00260 Glycine, serine and threonine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827448 834791 100809779 100791905 101259867 101251299 4331294 100286111 103868219 103827649 100852627 18094609 7461982 11426938 11428500 123449992 107929393 107934095 106402097 106377282 5728093 8081560 102590335 102625349 100844926 107802892 107770420
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