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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107929563   eukaryotic translation initiation factor 3 subunit F 
 ghi-r.1   107919986   eukaryotic translation initiation factor 3 subunit F 
 ghi-r.1   107934980   eukaryotic translation initiation factor 3 subunit F 
 ghi-r.1   121207857   eukaryotic translation initiation factor 3 subunit F 
 ath-u.5   EIF2   eukaryotic translation initiation factor 2 
 bra-r.6   103857894   eukaryotic translation initiation factor 3 subunit F 
 bra-r.6   103866990   eukaryotic translation initiation factor 3 subunit F 
 bna-r.1   106420802   eukaryotic translation initiation factor 3 subunit F 
 bna-r.1   106438056   eukaryotic translation initiation factor 3 subunit F 
 bna-r.1   106450827   eukaryotic translation initiation factor 3 subunit F 
 cit-r.1   102577985   putative eukaryotic translation initiation factor 1 
 gma-u.5   100811797   eukaryotic translation initiation factor 3 subunit F-like 
 gma-u.5   100790913   eukaryotic translation initiation factor 3 subunit F 
 gma-u.5   100786716   eukaryotic translation initiation factor 3 subunit F-like 
 vvi-u.5   100249540   eukaryotic translation initiation factor 3 subunit F 
 ppo-u.5   7490341   eukaryotic translation initiation factor 3 subunit F 
 mtr-u.5   11408201   eukaryotic translation initiation factor 3 subunit F 
 mtr-u.5   11408253   eukaryotic translation initiation factor 3 subunit F 
 sly-u.5   101255947   eukaryotic translation initiation factor 3 subunit F 
 sly-u.5   101255595   eukaryotic translation initiation factor 3 subunit F 
 sot-r.1   102585801   eukaryotic translation initiation factor 3 subunit F-like 
 sot-r.1   102586073   eukaryotic translation initiation factor 3 subunit F 
 nta-r.1   107796445   eukaryotic translation initiation factor 3 subunit F 
 nta-r.1   107787937   eukaryotic translation initiation factor 3 subunit F 
 nta-r.1   107765783   eukaryotic translation initiation factor 3 subunit F-like 
 osa-u.5   4337552   eukaryotic translation initiation factor 3 subunit F 
 zma-u.5   100272886   STIP1 and U box-containing protein 1 
 tae-r.2   123132023   eukaryotic translation initiation factor 3 subunit F 
 tae-r.2   123136012   eukaryotic translation initiation factor 3 subunit F 
 tae-r.2   123143503   eukaryotic translation initiation factor 3 subunit F 
 hvu-r.1   123401973   eukaryotic translation initiation factor 3 subunit F 
 sbi-r.1   8061063   eukaryotic translation initiation factor 3 subunit F 
 bdi-r.1   100836953   eukaryotic translation initiation factor 3 subunit F 
 cre-r.1   CHLRE_16g654500v5   uncharacterized protein 

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Top 50 coexpressed genes to 107929563 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107929563 (ghi-r.1 coexpression data)

CoexMap"107929563"


ghiLOC107929563 | Entrez gene ID : 107929563    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 3 1 1 2 2 2 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006413 [list] [network] translational initiation  (151 genes)  IEA  
GO CC
GO:0071541 [list] [network] eukaryotic translation initiation factor 3 complex, eIF3m  (14 genes)  IEA  
GO MF
GO:0031369 [list] [network] translation initiation factor binding  (33 genes)  IEA  
GO:0003743 [list] [network] translation initiation factor activity  (198 genes)  IEA  
GO:0008237 [list] [network] metallopeptidase activity  (232 genes)  IEA  
Protein NP_001385373.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  chlo 1,  nucl 1  (predict for NP_001385373.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001385373.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107929563
ghi-r.1
for
107919986
ghi-r.1
for
107934980
ghi-r.1
for
121207857
ath-u.5
for
EIF2
bra-r.6
for
103857894
bra-r.6
for
103866990
bna-r.1
for
106420802
bna-r.1
for
106438056
bna-r.1
for
106450827
cit-r.1
for
102577985
gma-u.5
for
100811797
gma-u.5
for
100790913
gma-u.5
for
100786716
vvi-u.5
for
100249540
ppo-u.5
for
7490341
mtr-u.5
for
11408201
mtr-u.5
for
11408253
sly-u.5
for
101255947
sly-u.5
for
101255595
sot-r.1
for
102585801
sot-r.1
for
102586073
nta-r.1
for
107796445
nta-r.1
for
107787937
nta-r.1
for
107765783
osa-u.5
for
4337552
zma-u.5
for
100272886
tae-r.2
for
123132023
tae-r.2
for
123136012
tae-r.2
for
123143503
hvu-r.1
for
123401973
sbi-r.1
for
8061063
bdi-r.1
for
100836953
cre-r.1
for
CHLRE_16g654500v5


Ortholog ID: 5484
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma gma vvi ppo mtr mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107919986 LOC107934980 LOC121207857 EIF2 LOC103857894 LOC103866990 LOC106420802 LOC106438056 LOC106450827 LOC102577985 LOC100811797 LOC100786716 LOC100775223 LOC100249540 LOC7490341 LOC11408201 LOC11408253 LOC101255947 LOC101255595 LOC102585801 LOC102586073 LOC107787937 LOC107765783 LOC107800650 LOC4337552 LOC100272886 LOC123132023 LOC123136012 LOC123143503 LOC123401973 LOC8061063 LOC100836953 CHLRE_16g654500v5
Function* eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 2 eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F putative eukaryotic translation initiation factor 1 eukaryotic translation initiation factor 3 subunit F-like eukaryotic translation initiation factor 3 subunit F-like eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F-like eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F-like eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F STIP1 and U box-containing protein 1 eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F eukaryotic translation initiation factor 3 subunit F uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr00261 Monobactam biosynthesis 2
mtr00300 Lysine biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
zma03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107919986 107934980 121207857 818587 103857894 103866990 106420802 106438056 106450827 102577985 100811797 100786716 100775223 100249540 7490341 11408201 11408253 101255947 101255595 102585801 102586073 107787937 107765783 107800650 4337552 100272886 123132023 123136012 123143503 123401973 8061063 100836953 5723764
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