ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107929570	protein DOWNY MILDEW RESISTANCE 6
ghi-r.1	107947187	protein DOWNY MILDEW RESISTANCE 6
ghi-r.1	107948034	protein DOWNY MILDEW RESISTANCE 6
ghi-r.1	107909393	protein DOWNY MILDEW RESISTANCE 6
ath-u.5	DMR6	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
bra-r.6	103874321	protein DOWNY MILDEW RESISTANCE 6
bra-r.6	103854853	protein DOWNY MILDEW RESISTANCE 6
bna-r.1	106348250	protein DOWNY MILDEW RESISTANCE 6
bna-r.1	106404278	protein DOWNY MILDEW RESISTANCE 6
bna-r.1	106382609	protein DOWNY MILDEW RESISTANCE 6-like
cit-r.1	102630759	uncharacterized LOC102630759
cit-r.1	102630352	protein DOWNY MILDEW RESISTANCE 6
gma-u.5	100782253	protein DOWNY MILDEW RESISTANCE 6
gma-u.5	100805464	protein DOWNY MILDEW RESISTANCE 6
vvi-u.5	100254096	protein DOWNY MILDEW RESISTANCE 6
vvi-u.5	100854106	flavanone 3-dioxygenase-like
ppo-u.5	7496461	protein DOWNY MILDEW RESISTANCE 6
ppo-u.5	7464473	protein DOWNY MILDEW RESISTANCE 6
mtr-u.5	11425208	protein DOWNY MILDEW RESISTANCE 6
sly-u.5	DMR6-1	protein DMR6-like oxygenase
sly-u.5	101257381	2-oxoglutarate Fe(II) dependent oxygenase superfamily protein
sot-r.1	102604390	2'-deoxymugineic-acid 2'-dioxygenase-like
sot-r.1	102590513	naringenin,2-oxoglutarate 3-dioxygenase-like
nta-r.1	107815210	protein DOWNY MILDEW RESISTANCE 6-like
nta-r.1	107829090	protein DOWNY MILDEW RESISTANCE 6
osa-u.5	4349238	flavanone 3-dioxygenase 2-like
osa-u.5	4336764	flavanone 3-dioxygenase 2-like
osa-u.5	4331443	flavanone 3-dioxygenase 2-like
zma-u.5	100284800	uncharacterized LOC100284800
tae-r.2	123093769	flavanone 3-dioxygenase 2
tae-r.2	123046226	flavanone 3-dioxygenase 2
tae-r.2	123105945	flavanone 3-dioxygenase 2
hvu-r.1	123427422	flavanone 3-dioxygenase 2-like
hvu-r.1	123449879	flavanone 3-dioxygenase 2-like
sbi-r.1	8085720	protein DOWNY MILDEW RESISTANCE 6
sbi-r.1	8057682	protein DOWNY MILDEW RESISTANCE 6
sbi-r.1	8058814	protein DOWNY MILDEW RESISTANCE 6
bdi-r.1	100841472	flavanone 3-dioxygenase 2

Top 50 coexpressed genes to 107929570 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107929570 (ghi-r.1 coexpression data)

CoexMap"107929570"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016716526.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 4, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1

(predict for XP_016716526.1)

Subcellular
localization
TargetP

other 6

(predict for XP_016716526.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107929570	ghi-r.1 for 107947187	ghi-r.1 for 107948034	ghi-r.1 for 107909393	ath-u.5 for DMR6	bra-r.6 for 103874321	bra-r.6 for 103854853	bna-r.1 for 106348250	bna-r.1 for 106404278	bna-r.1 for 106382609	cit-r.1 for 102630759	cit-r.1 for 102630352	gma-u.5 for 100782253	gma-u.5 for 100805464	vvi-u.5 for 100254096	vvi-u.5 for 100854106	ppo-u.5 for 7496461	ppo-u.5 for 7464473	mtr-u.5 for 11425208	sly-u.5 for DMR6-1	sly-u.5 for 101257381	sot-r.1 for 102604390	sot-r.1 for 102590513	nta-r.1 for 107815210	nta-r.1 for 107829090	osa-u.5 for 4349238	osa-u.5 for 4336764	osa-u.5 for 4331443	zma-u.5 for 100284800	tae-r.2 for 123093769	tae-r.2 for 123046226	tae-r.2 for 123105945	hvu-r.1 for 123427422	hvu-r.1 for 123449879	sbi-r.1 for 8085720	sbi-r.1 for 8057682	sbi-r.1 for 8058814	bdi-r.1 for 100841472

Ortholog

Ortholog ID: 4621

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

DMR6

DMR6-1

Function^*