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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107929824   cullin-4 
 ghi-r.1   107917119   cullin-4 
 ghi-r.1   107959742   cullin-4 

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Top 50 coexpressed genes to 107929824 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107929824 (ghi-r.1 coexpression data)

CoexMap"107929824"


ghiLOC107929824 | Entrez gene ID : 107929824    
Species ghi vvi bdi bna ppo sbi gma cit hvu sot sly nta osa tae zma cre mtr ath bra
Paralog 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (782 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO:0031461 [list] [network] cullin-RING ubiquitin ligase complex  (306 genes)  IEA  
GO MF
GO:0031625 [list] [network] ubiquitin protein ligase binding  (108 genes)  IEA  
Protein XP_016716829.1 [sequence] [blastp]
XP_040971259.1 [sequence] [blastp]
XP_040971260.1 [sequence] [blastp]
XP_040971261.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 3,  cyto 2,  extr 1,  cysk 1,  golg 1  (predict for XP_016716829.1)
chlo 3,  nucl 3,  cyto 2,  extr 1,  cysk 1,  golg 1  (predict for XP_040971259.1)
chlo 3,  nucl 3,  cyto 2,  extr 1,  cysk 1,  golg 1  (predict for XP_040971260.1)
chlo 3,  nucl 3,  cyto 2,  extr 1,  cysk 1,  golg 1  (predict for XP_040971261.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for XP_016716829.1)
other 8,  scret 3  (predict for XP_040971259.1)
other 8,  scret 3  (predict for XP_040971260.1)
other 8,  scret 3  (predict for XP_040971261.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107929824
ghi-r.1
for
107917119
ghi-r.1
for
107959742


Ortholog ID: 27625
Species ghi ghi ghi
Symbol LOC107929824 LOC107917119 LOC107959742
Function* cullin-4 cullin-4 cullin-4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 3
ghi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 6
ghi04120 Ubiquitin mediated proteolysis 6
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 6
ghi04120 Ubiquitin mediated proteolysis 6
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107929824 107917119 107959742
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