ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107929920	F-box/LRR-repeat protein 15
ath-u.5	SLOMO	F-box family protein
gma-u.5	100786178	F-box/LRR-repeat protein 15
gma-u.5	100782842	F-box/LRR-repeat protein 15
gma-u.5	100817100	F-box/LRR-repeat protein 15
vvi-u.5	100262977	F-box/LRR-repeat protein 15
ppo-u.5	7491991	F-box/LRR-repeat protein 15
ppo-u.5	7461579	F-box/LRR-repeat protein 15
mtr-u.5	11432407	F-box/LRR-repeat protein 15
sly-u.5	101243733	F-box/LRR-repeat protein 15
osa-u.5	4348553	F-box/LRR-repeat protein 15
zma-u.5	103643599	F-box/LRR-repeat protein 15
zma-u.5	100384416	uncharacterized LOC100384416

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(10797 genes)

IEA

Protein

XP_016716947.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 1, cysk 1

(predict for XP_016716947.2)

Subcellular
localization
TargetP

other 9

(predict for XP_016716947.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107929920	ath-u.5 for SLOMO	gma-u.5 for 100786178	gma-u.5 for 100782842	gma-u.5 for 100817100	vvi-u.5 for 100262977	ppo-u.5 for 7491991	ppo-u.5 for 7461579	mtr-u.5 for 11432407	sly-u.5 for 101243733	osa-u.5 for 4348553	zma-u.5 for 103643599	zma-u.5 for 100384416

Ortholog ID: 5363

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

SLOMO

Function^*

F-box/LRR-repeat protein 15

F-box family protein

F-box/LRR-repeat protein 15

uncharacterized LOC107830693

F-box/LRR-repeat protein 15

uncharacterized LOC100384416

F-box/LRR-repeat protein 15

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	4
ghi00730	Thiamine metabolism	2
ghi00900	Terpenoid backbone biosynthesis	2
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	4
ghi03018	RNA degradation	2
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2
bra04136	Autophagy - other	2
bra04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00010	Glycolysis / Gluconeogenesis	2
bra00030	Pentose phosphate pathway	2
bra00051	Fructose and mannose metabolism	2
bra00052	Galactose metabolism	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03018	RNA degradation	2
cit03015	mRNA surveillance pathway	2
cit03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	3
gma04142	Lysosome	2
gma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2
ppo04141	Protein processing in endoplasmic reticulum	2
ppo04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2
ppo04136	Autophagy - other	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	5
zma04144	Endocytosis	4
zma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

107900983

107929920

829457

103849083

103834495

106361106

106361108

102617182

100786178

100803643

100262977

7491991

7461579

11432407

101243733

102599507

107805846

107830693

4348553

100384416

103643599

123118612

123180899

123429315

8067563

100844904

5722499

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107929920 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107929920 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	sot	nta	cre	tae
Paralog	1	1	3	1	2	1	1	1	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107929920 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107929920 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**