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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107930160   40S ribosomal protein S13 
 ath-u.5   AT3G60770   Ribosomal protein S13/S15 
 ath-u.5   RPS13A   ribosomal protein S13A 
 gma-u.5   100790163   40S ribosomal protein S13 
 gma-u.5   RPS13   ribosomal protein S13 
 vvi-u.5   100242961   small ribosomal subunit protein uS15 
 vvi-u.5   100242146   small ribosomal subunit protein uS15 
 ppo-u.5   7497358   40S ribosomal protein S13-1 
 ppo-u.5   7476757   40S ribosomal protein S13 
 ppo-u.5   7482181   40S ribosomal protein S13-2 
 mtr-u.5   11425556   40S ribosomal protein S13 
 mtr-u.5   11409996   40S ribosomal protein S13 
 mtr-u.5   11443116   40S ribosomal protein S13 
 sly-u.5   101245893   small ribosomal subunit protein uS15 
 sly-u.5   101250446   small ribosomal subunit protein uS15 
 sly-u.5   101251264   small ribosomal subunit protein uS15 
 osa-u.5   4344524   40S ribosomal protein S13-2-like 
 osa-u.5   4344523   40S ribosomal protein S13-1 
 osa-u.5   4343679   small ribosomal subunit protein uS15y-like 
 zma-u.5   542726   ribosomal protein13 
 zma-u.5   100272255   ribosomal protein13 
 zma-u.5   100216794   40S ribosomal protein S13 

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Top 50 coexpressed genes to 107930160 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107930160 (ghi-r.1 coexpression data)

CoexMap"107930160"


ghiLOC107930160 | Entrez gene ID : 107930160    
Species ghi ath gma vvi ppo mtr sly osa zma cre cit hvu bdi sot bra sbi tae nta bna
Paralog 1 2 2 2 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (268 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (469 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0070181 [list] [network] small ribosomal subunit rRNA binding  (23 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016717229.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto_nucl 3,  cyto 2,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_016717229.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_016717229.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107930160

.
ath-u.5
for
AT3G60770

.
ath-u.5
for
RPS13A

.
gma-u.5
for
100790163

.
gma-u.5
for
RPS13

.
vvi-u.5
for
100242961

.
vvi-u.5
for
100242146

.
ppo-u.5
for
7497358

.
ppo-u.5
for
7476757

.
ppo-u.5
for
7482181

.
mtr-u.5
for
11425556

.
mtr-u.5
for
11409996

.
mtr-u.5
for
11443116

.
sly-u.5
for
101245893

.
sly-u.5
for
101250446

.
sly-u.5
for
101251264

.
osa-u.5
for
4344524

.
osa-u.5
for
4344523

.
osa-u.5
for
4343679

.
zma-u.5
for
542726

.
zma-u.5
for
100272255

.
zma-u.5
for
100216794

.


Ortholog ID: 1210
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol RPS13A AT3G60770 LOC100790163 RPS13 ACI39 LOC101250446 LOC4343679 LOC4344523 LOC542726 LOC100272255 LOC103866881 LOC103862863 LOC100242961 LOC100242146 LOC7476757 LOC7482181 LOC11425556 LOC11409996 LOC123147547 LOC123052329 LOC123425609 LOC123407256 LOC121204480 LOC107952900 LOC111215159 LOC106390357 CHLRE_07g331900v5 LOC8066103 LOC8066106 LOC102582176 LOC102586531 LOC102619943 LOC102623025 LOC100825183 LOC100840839 LOC107808791 LOC142177559
Function* ribosomal protein S13A Ribosomal protein S13/S15 40S ribosomal protein S13 ribosomal protein S13 cytoplasmic ribosomal protein S13 small ribosomal subunit protein uS15 small ribosomal subunit protein uS15y-like 40S ribosomal protein S13-1 ribosomal protein13 ribosomal protein13 40S ribosomal protein S13-2 40S ribosomal protein S13-2 small ribosomal subunit protein uS15 small ribosomal subunit protein uS15 40S ribosomal protein S13 40S ribosomal protein S13-2 40S ribosomal protein S13 40S ribosomal protein S13 40S ribosomal protein S13-1 40S ribosomal protein S13-1 40S ribosomal protein S13-1-like 40S ribosomal protein S13-1 40S ribosomal protein S13 40S ribosomal protein S13 40S ribosomal protein S13-2 40S ribosomal protein S13-2-like ribosomal protein S13 40S ribosomal protein S13 40S ribosomal protein S13 40S ribosomal protein S13-like 40S ribosomal protein S13 40S ribosomal protein S13 40S ribosomal protein S13 40S ribosomal protein S13-1 40S ribosomal protein S13 small ribosomal subunit protein uS15 small ribosomal subunit protein uS15-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
hvu03018 RNA degradation 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi00053 Ascorbate and aldarate metabolism 3
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi00053 Ascorbate and aldarate metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 19
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828167 825248 100790163 547745 778333 101250446 4343679 4344523 542726 100272255 103866881 103862863 100242961 100242146 7476757 7482181 11425556 11409996 123147547 123052329 123425609 123407256 121204480 107952900 111215159 106390357 5716018 8066103 8066106 102582176 102586531 102619943 102623025 100825183 100840839 107808791 142177559
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