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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107930269   CLP protease regulatory subunit CLPX1, mitochondrial 
 ghi-r.1   107947243   CLP protease regulatory subunit CLPX1, mitochondrial 
 ghi-r.1   107906309   CLP protease regulatory subunit CLPX2, mitochondrial 
 ghi-r.1   107909122   CLP protease regulatory subunit CLPX3, mitochondrial 
 ath-u.5   AT5G49840   ATP-dependent Clp protease 
 ath-u.5   CLPX   CLP protease regulatory subunit X 
 ath-u.5   AT1G33360   ATP-dependent Clp protease 
 bra-r.6   103844840   CLP protease regulatory subunit CLPX2, mitochondrial 
 bra-r.6   103857083   CLP protease regulatory subunit CLPX1, mitochondrial 
 bra-r.6   103840066   CLP protease regulatory subunit CLPX3, mitochondrial 
 bna-r.1   106418579   CLP protease regulatory subunit CLPX2, mitochondrial-like 
 bna-r.1   106421200   CLP protease regulatory subunit CLPX3, mitochondrial 
 bna-r.1   111213111   CLP protease regulatory subunit CLPX1, mitochondrial-like 
 cit-r.1   102622638   CLP protease regulatory subunit CLPX2, mitochondrial 
 cit-r.1   102627049   CLP protease regulatory subunit CLPX1, mitochondrial 
 cit-r.1   102631160   CLP protease regulatory subunit CLPX1, mitochondrial 
 gma-u.5   100779768   CLP protease regulatory subunit CLPX1, mitochondrial 
 gma-u.5   100805340   CLP protease regulatory subunit CLPX1, mitochondrial 
 gma-u.5   100810042   CLP protease regulatory subunit CLPX1, mitochondrial 
 vvi-u.5   100264001   CLP protease regulatory subunit CLPX1, mitochondrial 
 vvi-u.5   100260864   CLP protease regulatory subunit CLPX2, mitochondrial 
 vvi-u.5   100249902   CLP protease regulatory subunit CLPX3, mitochondrial 
 ppo-u.5   7464270   CLP protease regulatory subunit CLPX1, mitochondrial 
 ppo-u.5   18104285   CLP protease regulatory subunit CLPX3, mitochondrial 
 ppo-u.5   18098372   CLP protease regulatory subunit CLPX3, mitochondrial 
 mtr-u.5   11441471   CLP protease regulatory subunit CLPX1, mitochondrial 
 mtr-u.5   11442898   CLP protease regulatory subunit CLPX1, mitochondrial 
 sly-u.5   101258138   CLP protease regulatory subunit CLPX1, mitochondrial 
 sly-u.5   101255539   CLP protease regulatory subunit CLPX2, mitochondrial 
 sly-u.5   101259945   CLP protease regulatory subunit CLPX1, mitochondrial 
 sot-r.1   102581121   CLP protease regulatory subunit CLPX1, mitochondrial-like 
 sot-r.1   102602166   CLP protease regulatory subunit CLPX1, mitochondrial 
 sot-r.1   102602500   CLP protease regulatory subunit CLPX2, mitochondrial 
 nta-r.1   107763130   CLP protease regulatory subunit CLPX1, mitochondrial-like 
 nta-r.1   107769993   CLP protease regulatory subunit CLPX2, mitochondrial-like 
 nta-r.1   107782431   CLP protease regulatory subunit CLPX1, mitochondrial 
 osa-u.5   4329696   CLP protease regulatory subunit CLPX1, mitochondrial 
 osa-u.5   4324891   CLP protease regulatory subunit CLPX1, mitochondrial 
 osa-u.5   4329067   CLP protease regulatory subunit CLPX1, mitochondrial 
 zma-u.5   100275780   uncharacterized LOC100275780 
 zma-u.5   118472073   CLP protease regulatory subunit CLPX1, mitochondrial 
 zma-u.5   100281116   ATP-dependent Clp protease ATP-binding subunit clpX 
 tae-r.2   123144528   CLP protease regulatory subunit CLPX1, mitochondrial 
 tae-r.2   123137222   CLP protease regulatory subunit CLPX1, mitochondrial 
 tae-r.2   123062917   CLP protease regulatory subunit CLPX1, mitochondrial 
 hvu-r.1   123406188   CLP protease regulatory subunit CLPX1, mitochondrial-like 
 hvu-r.1   123445102   CLP protease regulatory subunit CLPX1, mitochondrial-like 
 sbi-r.1   8083129   uncharacterized LOC8083129 
 sbi-r.1   8077761   CLP protease regulatory subunit CLPX1, mitochondrial 
 sbi-r.1   8072595   CLP protease regulatory subunit CLPX1, mitochondrial 
 bdi-r.1   100828710   CLP protease regulatory subunit CLPX1, mitochondrial 
 bdi-r.1   100828675   CLP protease regulatory subunit CLPX1, mitochondrial 
 bdi-r.1   100824110   CLP protease regulatory subunit CLPX1, mitochondrial 
 cre-r.1   CHLRE_16g663350v5   uncharacterized protein 
 cre-r.1   CHLRE_10g461550v5   uncharacterized protein 
 cre-r.1   CHLRE_16g663280v5   uncharacterized protein 

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Top 50 coexpressed genes to 107930269 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107930269 (ghi-r.1 coexpression data)

CoexMap"107930269"


ghiLOC107930269 | Entrez gene ID : 107930269    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 3 3 2 3 3 3 3 3 3 2 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006457 [list] [network] protein folding  (443 genes)  IEA  
GO:0051603 [list] [network] proteolysis involved in protein catabolic process  (1058 genes)  IEA  
GO CC
GO:0005759 [list] [network] mitochondrial matrix  (164 genes)  IEA  
GO MF
GO:0140662 [list] [network] ATP-dependent protein folding chaperone  (139 genes)  IEA  
GO:0051082 [list] [network] unfolded protein binding  (287 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (974 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016717366.2 [sequence] [blastp]
XP_040932916.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 4  (predict for XP_016717366.2)
mito 7,  chlo 3  (predict for XP_040932916.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_016717366.2)
chlo 6  (predict for XP_040932916.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107930269
ghi-r.1
for
107947243
ghi-r.1
for
107906309
ghi-r.1
for
107909122
ath-u.5
for
AT5G49840
ath-u.5
for
CLPX
ath-u.5
for
AT1G33360
bra-r.6
for
103844840
bra-r.6
for
103857083
bra-r.6
for
103840066
bna-r.1
for
106418579
bna-r.1
for
106421200
bna-r.1
for
111213111
cit-r.1
for
102622638
cit-r.1
for
102627049
cit-r.1
for
102631160
gma-u.5
for
100779768
gma-u.5
for
100805340
gma-u.5
for
100810042
vvi-u.5
for
100264001
vvi-u.5
for
100260864
vvi-u.5
for
100249902
ppo-u.5
for
7464270
ppo-u.5
for
18104285
ppo-u.5
for
18098372
mtr-u.5
for
11441471
mtr-u.5
for
11442898
sly-u.5
for
101258138
sly-u.5
for
101255539
sly-u.5
for
101259945
sot-r.1
for
102581121
sot-r.1
for
102602166
sot-r.1
for
102602500
nta-r.1
for
107763130
nta-r.1
for
107769993
nta-r.1
for
107782431
osa-u.5
for
4329696
osa-u.5
for
4324891
osa-u.5
for
4329067
zma-u.5
for
100275780
zma-u.5
for
118472073
zma-u.5
for
100281116
tae-r.2
for
123144528
tae-r.2
for
123137222
tae-r.2
for
123062917
hvu-r.1
for
123406188
hvu-r.1
for
123445102
sbi-r.1
for
8083129
sbi-r.1
for
8077761
sbi-r.1
for
8072595
bdi-r.1
for
100828710
bdi-r.1
for
100828675
bdi-r.1
for
100824110
cre-r.1
for
CHLRE_16g663350v5
cre-r.1
for
CHLRE_10g461550v5
cre-r.1
for
CHLRE_16g663280v5


Ortholog ID: 1592
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi bdi cre cre cre
Symbol LOC107906309 LOC107909122 LOC107928362 AT5G49840 CLPX AT1G33360 LOC103857083 LOC103840066 LOC103844812 LOC111213111 LOC106418194 LOC106387473 LOC102622638 LOC102627049 LOC102631160 LOC100805340 LOC100810042 LOC100816191 LOC100264001 LOC100260864 LOC100249902 LOC7464270 LOC18104285 LOC18098372 LOC11441471 LOC11442898 LOC101258138 LOC101255539 LOC101259945 LOC102581121 LOC102602166 LOC102602500 LOC107782431 LOC107818085 LOC107794973 LOC4329696 LOC4324891 LOC4329067 LOC100275780 LOC118472073 LOC100281116 LOC123144528 LOC123062917 LOC123071784 LOC123406188 LOC123445102 LOC8083129 LOC8072595 LOC8063154 LOC100828710 LOC100828675 LOC100824110 CHLRE_16g663350v5 CHLRE_10g461550v5 CHLRE_16g663280v5
Function* CLP protease regulatory subunit CLPX2, mitochondrial CLP protease regulatory subunit CLPX3, mitochondrial CLP protease regulatory subunit CLPX3, mitochondrial ATP-dependent Clp protease CLP protease regulatory subunit X ATP-dependent Clp protease CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX3, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial-like CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX2, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX2, mitochondrial CLP protease regulatory subunit CLPX3, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX3, mitochondrial CLP protease regulatory subunit CLPX3, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX2, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial-like CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX2, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX3, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial uncharacterized LOC100275780 CLP protease regulatory subunit CLPX1, mitochondrial ATP-dependent Clp protease ATP-binding subunit clpX CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial-like CLP protease regulatory subunit CLPX1, mitochondrial-like uncharacterized LOC8083129 CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial CLP protease regulatory subunit CLPX1, mitochondrial uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
ath00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00240 Pyrimidine metabolism 3
bra00410 beta-Alanine metabolism 3
bra00770 Pantothenate and CoA biosynthesis 3
bra00071 Fatty acid degradation 3
bra01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04146 Peroxisome 2
mtr04016 MAPK signaling pathway - plant 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 4
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 2
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 2
cre00410 beta-Alanine metabolism 2
cre00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 2
cre00410 beta-Alanine metabolism 2
cre00770 Pantothenate and CoA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107906309 107909122 107928362 835047 835416 840230 103857083 103840066 103844812 111213111 106418194 106387473 102622638 102627049 102631160 100805340 100810042 100816191 100264001 100260864 100249902 7464270 18104285 18098372 11441471 11442898 101258138 101255539 101259945 102581121 102602166 102602500 107782431 107818085 107794973 4329696 4324891 4329067 100275780 118472073 100281116 123144528 123062917 123071784 123406188 123445102 8083129 8072595 8063154 100828710 100828675 100824110 5723520 5724155 66056583
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