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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107930410   preprotein translocase subunit SCY2, chloroplastic 
 ghi-r.1   107936885   preprotein translocase subunit SCY2, chloroplastic 
 ath-u.5   SCY2   SecY protein transport family protein 
 bra-r.6   103857379   preprotein translocase subunit SCY2, chloroplastic 
 bna-r.1   106437737   preprotein translocase subunit SCY2, chloroplastic-like 
 bna-r.1   106445694   preprotein translocase subunit SCY2, chloroplastic 
 cit-r.1   102617776   preprotein translocase subunit SCY2, chloroplastic 
 gma-u.5   100803256   preprotein translocase subunit SCY2, chloroplastic 
 gma-u.5   100781502   preprotein translocase subunit SCY2, chloroplastic 
 vvi-u.5   100256337   preprotein translocase subunit SCY2, chloroplastic 
 ppo-u.5   7480700   preprotein translocase subunit SCY2, chloroplastic 
 mtr-u.5   25499111   preprotein translocase subunit SCY2, chloroplastic 
 sly-u.5   101255133   preprotein translocase subunit SCY2, chloroplastic 
 sot-r.1   102583744   preprotein translocase subunit SCY2, chloroplastic 
 nta-r.1   107825802   preprotein translocase subunit SCY2, chloroplastic 
 nta-r.1   107791670   preprotein translocase subunit SCY2, chloroplastic 
 osa-u.5   4338708   preprotein translocase subunit SCY2, chloroplastic 
 zma-u.5   100272509   Preprotein translocase subunit SCY2 chloroplastic 
 tae-r.2   123181926   preprotein translocase subunit SCY2, chloroplastic 
 tae-r.2   123131848   preprotein translocase subunit SCY2, chloroplastic 
 tae-r.2   123054821   preprotein translocase subunit SCY2, chloroplastic 
 hvu-r.1   123442027   preprotein translocase subunit SCY2, chloroplastic 
 sbi-r.1   8085096   preprotein translocase subunit SCY2, chloroplastic 
 bdi-r.1   100829901   preprotein translocase subunit SCY2, chloroplastic 

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Top 50 coexpressed genes to 107930410 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107930410 (ghi-r.1 coexpression data)

CoexMap"107930410"


ghiLOC107930410 | Entrez gene ID : 107930410    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006616 [list] [network] SRP-dependent cotranslational protein targeting to membrane, translocation  (27 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (283 genes)  IEA  
GO MF
GO:0008320 [list] [network] protein transmembrane transporter activity  (76 genes)  IEA  
GO:0005048 [list] [network] signal sequence binding  (163 genes)  IEA  
Protein XP_016717563.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  vacu 1,  golg 1,  mito 1,  E.R. 1  (predict for XP_016717563.2)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for XP_016717563.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107930410
ghi-r.1
for
107936885
ath-u.5
for
SCY2
bra-r.6
for
103857379
bna-r.1
for
106437737
bna-r.1
for
106445694
cit-r.1
for
102617776
gma-u.5
for
100803256
gma-u.5
for
100781502
vvi-u.5
for
100256337
ppo-u.5
for
7480700
mtr-u.5
for
25499111
sly-u.5
for
101255133
sot-r.1
for
102583744
nta-r.1
for
107825802
nta-r.1
for
107791670
osa-u.5
for
4338708
zma-u.5
for
100272509
tae-r.2
for
123181926
tae-r.2
for
123131848
tae-r.2
for
123054821
hvu-r.1
for
123442027
sbi-r.1
for
8085096
bdi-r.1
for
100829901


Ortholog ID: 10687
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107930410 LOC107936885 SCY2 LOC103857379 LOC106437737 LOC106445694 LOC102617776 LOC100803256 LOC100781502 LOC100256337 LOC7480700 LOC25499111 LOC101255133 LOC102583744 LOC107825802 LOC107791670 LOC4338708 LOC100272509 LOC123181926 LOC123131848 LOC123054821 LOC123442027 LOC8085096 LOC100829901
Function* preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic SecY protein transport family protein preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic-like preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic Preprotein translocase subunit SCY2 chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic preprotein translocase subunit SCY2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00650 Butanoate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107930410 107936885 817711 103857379 106437737 106445694 102617776 100803256 100781502 100256337 7480700 25499111 101255133 102583744 107825802 107791670 4338708 100272509 123181926 123131848 123054821 123442027 8085096 100829901
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