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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107930825   E3 ubiquitin-protein ligase ATL42 
 ghi-r.1   107901270   E3 ubiquitin-protein ligase ATL42 
 ghi-r.1   107932980   E3 ubiquitin-protein ligase ATL42 
 ath-u.5   AT4G28890   RING/U-box superfamily protein 
 bna-r.1   125580629   E3 ubiquitin-protein ligase ATL42-like 
 cit-r.1   102618502   E3 ubiquitin-protein ligase ATL42 
 gma-u.5   100806950   E3 ubiquitin-protein ligase ATL42-like 
 gma-u.5   100803207   E3 ubiquitin-protein ligase ATL42 
 vvi-u.5   100244010   E3 ubiquitin-protein ligase ATL42 
 mtr-u.5   25490128   E3 ubiquitin-protein ligase ATL42 
 mtr-u.5   11439998   E3 ubiquitin-protein ligase ATL42 
 sot-r.1   102600705   E3 ubiquitin-protein ligase ATL42-like 
 nta-r.1   107776385   E3 ubiquitin-protein ligase ATL42-like 
 nta-r.1   107775242   E3 ubiquitin-protein ligase ATL42-like 
 nta-r.1   107771373   E3 ubiquitin-protein ligase ATL42-like 
 osa-u.5   4339820   putative RING-H2 finger protein ATL12 
 zma-u.5   103630821   E3 ubiquitin-protein ligase ATL42 
 hvu-r.1   123422042   putative RING-H2 finger protein ATL12 
 sbi-r.1   8065344   putative RING-H2 finger protein ATL12 

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Top 50 coexpressed genes to 107930825 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107930825 (ghi-r.1 coexpression data)

CoexMap"107930825"


ghiLOC107930825 | Entrez gene ID : 107930825    
Species ghi ath bna cit gma vvi mtr sot nta osa zma hvu sbi bra cre ppo sly tae bdi
Paralog 3 1 1 1 2 1 2 1 3 1 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016718060.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  golg 2,  E.R. 1  (predict for XP_016718060.2)
Subcellular
localization
TargetP
scret 9  (predict for XP_016718060.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107930825
ghi-r.1
for
107901270
ghi-r.1
for
107932980
ath-u.5
for
AT4G28890
bna-r.1
for
125580629
cit-r.1
for
102618502
gma-u.5
for
100806950
gma-u.5
for
100803207
vvi-u.5
for
100244010
mtr-u.5
for
25490128
mtr-u.5
for
11439998
sot-r.1
for
102600705
nta-r.1
for
107776385
nta-r.1
for
107775242
nta-r.1
for
107771373
osa-u.5
for
4339820
zma-u.5
for
103630821
hvu-r.1
for
123422042
sbi-r.1
for
8065344


Ortholog ID: 2977
Species ghi ghi ath bna cit gma vvi mtr mtr sot nta nta nta osa zma hvu sbi
Symbol LOC107901270 LOC107932980 AT4G28890 LOC106359823 LOC102618502 LOC100806950 LOC100244010 LOC25490128 LOC11439998 LOC102600705 LOC107776385 LOC107775242 LOC107770747 LOC4339820 LOC103630821 LOC123422042 LOC8065344
Function* E3 ubiquitin-protein ligase ATL42 E3 ubiquitin-protein ligase ATL42 RING/U-box superfamily protein E3 ubiquitin-protein ligase ATL42-like E3 ubiquitin-protein ligase ATL42 E3 ubiquitin-protein ligase ATL42-like E3 ubiquitin-protein ligase ATL42 E3 ubiquitin-protein ligase ATL42 E3 ubiquitin-protein ligase ATL42 E3 ubiquitin-protein ligase ATL42-like E3 ubiquitin-protein ligase ATL42-like E3 ubiquitin-protein ligase ATL42-like E3 ubiquitin-protein ligase ATL42-like putative RING-H2 finger protein ATL12 E3 ubiquitin-protein ligase ATL42 putative RING-H2 finger protein ATL12 putative RING-H2 finger protein ATL12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 3
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 4
ghi04981 Folate transport and metabolism 4
ghi00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00480 Glutathione metabolism 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00902 Monoterpenoid biosynthesis 3
sot00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00910 Nitrogen metabolism 2
nta01200 Carbon metabolism 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00062 Fatty acid elongation 5
nta04626 Plant-pathogen interaction 5
nta00073 Cutin, suberine and wax biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00062 Fatty acid elongation 5
nta04626 Plant-pathogen interaction 5
nta00073 Cutin, suberine and wax biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107901270 107932980 829010 106359823 102618502 100806950 100244010 25490128 11439998 102600705 107776385 107775242 107770747 4339820 103630821 123422042 8065344
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