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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107930964   peptidyl-tRNA hydrolase, chloroplastic 
 ghi-r.1   107943182   peptidyl-tRNA hydrolase, chloroplastic 
 ghi-r.1   107930176   peptidyl-tRNA hydrolase, mitochondrial 
 ghi-r.1   107913856   peptidyl-tRNA hydrolase, mitochondrial 
 ath-u.5   AT5G19830   Peptidyl-tRNA hydrolase family protein 
 ath-u.5   AT1G18440   Peptidyl-tRNA hydrolase family protein 
 bra-r.6   103872606   peptidyl-tRNA hydrolase, chloroplastic 
 bra-r.6   103874987   peptidyl-tRNA hydrolase, mitochondrial 
 bna-r.1   106447836   peptidyl-tRNA hydrolase, mitochondrial 
 bna-r.1   106351433   peptidyl-tRNA hydrolase, chloroplastic-like 
 bna-r.1   111197783   peptidyl-tRNA hydrolase, mitochondrial 
 cit-r.1   102618374   peptidyl-tRNA hydrolase, mitochondrial 
 cit-r.1   102620100   peptidyl-tRNA hydrolase, chloroplastic 
 gma-u.5   100808506   peptidyl-tRNA hydrolase, mitochondrial-like 
 gma-u.5   100786518   peptidyl-tRNA hydrolase, mitochondrial 
 gma-u.5   100778386   peptidyl-tRNA hydrolase, chloroplastic 
 vvi-u.5   100264722   peptidyl-tRNA hydrolase, chloroplastic 
 vvi-u.5   100248426   peptidyl-tRNA hydrolase, mitochondrial 
 ppo-u.5   7457700   peptidyl-tRNA hydrolase, mitochondrial 
 ppo-u.5   7487098   peptidyl-tRNA hydrolase, mitochondrial 
 mtr-u.5   11411368   peptidyl-tRNA hydrolase, mitochondrial 
 mtr-u.5   11410122   peptidyl-tRNA hydrolase, chloroplastic 
 sly-u.5   101246392   peptidyl-tRNA hydrolase, mitochondrial 
 sly-u.5   101260616   peptidyl-tRNA hydrolase, mitochondrial 
 sot-r.1   102578257   peptidyl-tRNA hydrolase, mitochondrial 
 sot-r.1   102600992   peptidyl-tRNA hydrolase, mitochondrial 
 nta-r.1   107773067   peptidyl-tRNA hydrolase, mitochondrial 
 nta-r.1   107811970   peptidyl-tRNA hydrolase, mitochondrial 
 osa-u.5   4323881   peptidyl-tRNA hydrolase, mitochondrial-like 
 osa-u.5   4332828   CRS2-like protein, chloroplastic 
 osa-u.5   4339520   peptidyl-tRNA hydrolase, mitochondrial-like 
 zma-u.5   100217227   uncharacterized LOC100217227 
 zma-u.5   100281887   peptidyl-tRNA hydrolase 
 zma-u.5   103630687   peptidyl-tRNA hydrolase, mitochondrial 
 tae-r.2   123070502   peptidyl-tRNA hydrolase, mitochondrial 
 hvu-r.1   123431228   CRS2-like protein, chloroplastic 
 hvu-r.1   123444172   peptidyl-tRNA hydrolase, mitochondrial 
 hvu-r.1   123449091   peptidyl-tRNA hydrolase, mitochondrial-like 
 sbi-r.1   8082658   CRS2-like protein, chloroplastic 
 sbi-r.1   8068054   peptidyl-tRNA hydrolase, mitochondrial 
 sbi-r.1   8061102   peptidyl-tRNA hydrolase, mitochondrial 
 bdi-r.1   100826443   peptidyl-tRNA hydrolase, mitochondrial 
 bdi-r.1   100837817   peptidyl-tRNA hydrolase, mitochondrial 
 cre-r.1   CHLRE_02g076600v5   uncharacterized protein 

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Top 50 coexpressed genes to 107930964 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107930964 (ghi-r.1 coexpression data)

CoexMap"107930964"


ghiLOC107930964 | Entrez gene ID : 107930964    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 2 3 2 2 2 2 2 2 3 3 1 3 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004045 [list] [network] peptidyl-tRNA hydrolase activity  (20 genes)  IEA  
Protein XP_016718231.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_016718231.2)
Subcellular
localization
TargetP
chlo 5  (predict for XP_016718231.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107930964
ghi-r.1
for
107943182
ghi-r.1
for
107930176
ghi-r.1
for
107913856
ath-u.5
for
AT5G19830
ath-u.5
for
AT1G18440
bra-r.6
for
103872606
bra-r.6
for
103874987
bna-r.1
for
106447836
bna-r.1
for
106351433
bna-r.1
for
111197783
cit-r.1
for
102618374
cit-r.1
for
102620100
gma-u.5
for
100808506
gma-u.5
for
100786518
gma-u.5
for
100778386
vvi-u.5
for
100264722
vvi-u.5
for
100248426
ppo-u.5
for
7457700
ppo-u.5
for
7487098
mtr-u.5
for
11411368
mtr-u.5
for
11410122
sly-u.5
for
101246392
sly-u.5
for
101260616
sot-r.1
for
102578257
sot-r.1
for
102600992
nta-r.1
for
107773067
nta-r.1
for
107811970
osa-u.5
for
4323881
osa-u.5
for
4332828
osa-u.5
for
4339520
zma-u.5
for
100217227
zma-u.5
for
100281887
zma-u.5
for
103630687
tae-r.2
for
123070502
hvu-r.1
for
123431228
hvu-r.1
for
123444172
hvu-r.1
for
123449091
sbi-r.1
for
8082658
sbi-r.1
for
8068054
sbi-r.1
for
8061102
bdi-r.1
for
100826443
bdi-r.1
for
100837817
cre-r.1
for
CHLRE_02g076600v5


Ortholog ID: 2174
Species ghi ghi ghi ath ath bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa osa zma zma zma tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC107930964 LOC107943182 LOC107930176 AT5G19830 AT1G18440 LOC103872606 LOC103874987 LOC106351433 LOC111197783 LOC106427176 LOC102618374 LOC102620100 LOC100808506 LOC100786518 LOC100526866 LOC100264722 LOC100248426 LOC7457700 LOC7487098 LOC11411368 LOC11410122 LOC101246392 LOC101260616 LOC102578257 LOC102600992 LOC107773067 LOC107811970 LOC4323881 LOC4332828 LOC4339520 LOC100217227 LOC100281887 LOC103630687 LOC123070502 LOC123078913 LOC123431228 LOC123444172 LOC123449091 LOC8082658 LOC8068054 LOC8061102 LOC100826443 LOC100837817 LOC100839972 CHLRE_02g076600v5
Function* peptidyl-tRNA hydrolase, chloroplastic peptidyl-tRNA hydrolase, chloroplastic peptidyl-tRNA hydrolase, mitochondrial Peptidyl-tRNA hydrolase family protein Peptidyl-tRNA hydrolase family protein peptidyl-tRNA hydrolase, chloroplastic peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, chloroplastic-like peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, chloroplastic-like peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, chloroplastic peptidyl-tRNA hydrolase, mitochondrial-like peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, chloroplastic peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, chloroplastic peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial-like CRS2-like protein, chloroplastic peptidyl-tRNA hydrolase, mitochondrial-like uncharacterized LOC100217227 peptidyl-tRNA hydrolase peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial CRS2-like protein, chloroplastic peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial-like CRS2-like protein, chloroplastic peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial peptidyl-tRNA hydrolase, mitochondrial CRS2-like protein, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00300 Lysine biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00650 Butanoate metabolism 2
gma01200 Carbon metabolism 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 3
sbi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107930964 107943182 107930176 832103 838424 103872606 103874987 106351433 111197783 106427176 102618374 102620100 100808506 100786518 100526866 100264722 100248426 7457700 7487098 11411368 11410122 101246392 101260616 102578257 102600992 107773067 107811970 4323881 4332828 4339520 100217227 100281887 103630687 123070502 123078913 123431228 123444172 123449091 8082658 8068054 8061102 100826443 100837817 100839972 5727216
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