ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107931545	transmembrane protein 87B
ghi-r.1	107896829	transmembrane protein 87B
ghi-r.1	107962230	transmembrane protein 87B
ghi-r.1	107914524	transmembrane protein 87B
ath-u.5	AT1G61670	Lung seven transmembrane receptor family protein
bra-r.6	103830981	transmembrane protein 87A
bna-r.1	106376787	transmembrane protein 87A
bna-r.1	106376862	transmembrane protein 87A
cit-r.1	102629956	uncharacterized LOC102629956
cit-r.1	102609512	uncharacterized LOC102609512
gma-u.5	100816334	transmembrane protein 87B
vvi-u.5	100241566	uncharacterized LOC100241566
vvi-u.5	100241495	uncharacterized LOC100241495
ppo-u.5	7482600	uncharacterized LOC7482600
ppo-u.5	112327853	uncharacterized LOC112327853
mtr-u.5	11434446	transmembrane protein 87A
mtr-u.5	11423311	transmembrane protein 87B
sly-u.5	101262266	uncharacterized LOC101262266
sly-u.5	101248110	uncharacterized LOC101248110
sot-r.1	102583772	transmembrane protein 87B-like
sot-r.1	102594067	transmembrane protein 87B-like
nta-r.1	107817471	uncharacterized LOC107817471
nta-r.1	107800810	uncharacterized LOC107800810
nta-r.1	107792696	uncharacterized LOC107792696
osa-u.5	4332753	uncharacterized LOC4332753
zma-u.5	100383379	uncharacterized LOC100383379
zma-u.5	100273998	uncharacterized LOC100273998
tae-r.2	123092210	transmembrane protein 87B
tae-r.2	123085791	transmembrane protein 87B
tae-r.2	123097547	transmembrane protein 87B
hvu-r.1	123448706	transmembrane protein 87A
sbi-r.1	8082342	uncharacterized membrane protein YHL071W
bdi-r.1	100826377	transmembrane protein 87B

Top 50 coexpressed genes to 107931545 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107931545 (ghi-r.1 coexpression data)

CoexMap"107931545"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006810 [list] [network] transport

(4793 genes)

IEA

GO CC

GO:0005794 [list] [network] Golgi apparatus	(1381 genes)	IEA
GO:0016020 [list] [network] membrane	(8195 genes)	IEA

GO MF

Protein

XP_016718954.2 [sequence] [blastp]
XP_016718956.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, E.R. 2, chlo 1, nucl 1, vacu 1	(predict for XP_016718954.2)
plas 7, E.R. 1, vacu 1, golg 1, cyto_E.R. 1	(predict for XP_016718956.2)

Subcellular
localization
TargetP

scret 6, other 4	(predict for XP_016718954.2)
other 8	(predict for XP_016718956.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107931545	ghi-r.1 for 107896829	ghi-r.1 for 107962230	ghi-r.1 for 107914524	ath-u.5 for AT1G61670	bra-r.6 for 103830981	bna-r.1 for 106376787	bna-r.1 for 106376862	cit-r.1 for 102629956	cit-r.1 for 102609512	gma-u.5 for 100816334	vvi-u.5 for 100241566	vvi-u.5 for 100241495	ppo-u.5 for 7482600	ppo-u.5 for 112327853	mtr-u.5 for 11434446	mtr-u.5 for 11423311	sly-u.5 for 101262266	sly-u.5 for 101248110	sot-r.1 for 102583772	sot-r.1 for 102594067	nta-r.1 for 107817471	nta-r.1 for 107800810	nta-r.1 for 107792696	osa-u.5 for 4332753	zma-u.5 for 100383379	zma-u.5 for 100273998	tae-r.2 for 123092210	tae-r.2 for 123085791	tae-r.2 for 123097547	hvu-r.1 for 123448706	sbi-r.1 for 8082342	bdi-r.1 for 100826377

Ortholog

Ortholog ID: 6124

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

transmembrane protein 87B

Lung seven transmembrane receptor family protein

transmembrane protein 87A

uncharacterized LOC102629956

uncharacterized LOC102609512

transmembrane protein 87B

uncharacterized LOC100241566

uncharacterized LOC100241495

uncharacterized LOC7482600

uncharacterized LOC112327853

transmembrane protein 87A

transmembrane protein 87B

uncharacterized LOC101262266

uncharacterized LOC101248110

transmembrane protein 87B-like

uncharacterized LOC107800810

uncharacterized LOC107792696

uncharacterized LOC107773115

uncharacterized LOC4332753

uncharacterized LOC100383379

uncharacterized LOC100273998

transmembrane protein 87B

transmembrane protein 87A

uncharacterized membrane protein YHL071W

transmembrane protein 87B

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	4
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	4
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	2
bna00511	Other glycan degradation	2
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	2
bna04130	SNARE interactions in vesicular transport	2
bna00511	Other glycan degradation	2
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	2
cit00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	5
cit01230	Biosynthesis of amino acids	4
cit00630	Glyoxylate and dicarboxylate metabolism	3
cit00220	Arginine biosynthesis	2
cit00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	3
gma04517	IgSF CAM signaling	2
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	10
vvi01230	Biosynthesis of amino acids	10
vvi00010	Glycolysis / Gluconeogenesis	8
vvi00710	Carbon fixation by Calvin cycle	5
vvi00220	Arginine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	4
ppo00514	Other types of O-glycan biosynthesis	2
ppo03083	Polycomb repressive complex	2
ppo04144	Endocytosis	2
ppo04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2
mtr04144	Endocytosis	2
mtr05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	4
sot00510	N-Glycan biosynthesis	2
sot00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta00071	Fatty acid degradation	2
nta00280	Valine, leucine and isoleucine degradation	2
nta01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00510	N-Glycan biosynthesis	2
tae00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00510	N-Glycan biosynthesis	3
tae00513	Various types of N-glycan biosynthesis	3
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00510	N-Glycan biosynthesis	3
tae00513	Various types of N-glycan biosynthesis	3
tae04141	Protein processing in endoplasmic reticulum	2
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2
hvu04136	Autophagy - other	2
hvu03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

107931545

107962230

107914524

842464

103830981

106376787

106376862

102629956

102609512

100816334

100241566

100241495

7482600

112327853

11434446

11423311

101262266

101248110

102583772

102594067

107800810

107792696

107773115

4332753

100383379

100273998

123092210

123085791

123097547

123448706

8082342

100826377

The preparation time of this page was 2.0 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	1	2	2	1	2	2	2	2	2	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107931545 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107931545 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**