ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107932057	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
ghi-r.1	107909758	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
ghi-r.1	107912637	serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B'
ghi-r.1	107886802	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
ath-u.5	ATB' ALPHA	Protein phosphatase 2A regulatory B subunit family protein
ath-u.5	AT1G13460	Protein phosphatase 2A regulatory B subunit family protein
ath-u.5	AT5G25510	Protein phosphatase 2A regulatory B subunit family protein
bra-r.6	103869158	serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B'
bra-r.6	103859278	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
bra-r.6	103854746	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
bna-r.1	125580230	serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B'
bna-r.1	125608792	serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B'
bna-r.1	111214244	serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B'
cit-r.1	102606617	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
cit-r.1	102607694	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
cit-r.1	102612189	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
gma-u.5	100806230	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
gma-u.5	100807697	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
vvi-u.5	100253747	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
vvi-u.5	100252451	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
vvi-u.5	100258598	serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B'
ppo-u.5	7496643	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
ppo-u.5	7480937	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
ppo-u.5	7477048	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
mtr-u.5	11429629	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
mtr-u.5	11431523	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
mtr-u.5	11432697	serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B'
sly-u.5	101250942	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
sly-u.5	101257170	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
sly-u.5	101268818	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
sot-r.1	102581890	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
sot-r.1	102601978	serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B'
sot-r.1	102600904	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
nta-r.1	107791655	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
nta-r.1	107798431	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
nta-r.1	107798666	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
osa-u.5	4337970	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
osa-u.5	4336207	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
osa-u.5	4334757	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
zma-u.5	100279581	uncharacterized LOC100279581
zma-u.5	100280472	uncharacterized LOC100280472
zma-u.5	100281610	uncharacterized LOC100281610
tae-r.2	123114282	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
tae-r.2	123090678	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
tae-r.2	123053680	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
hvu-r.1	123449661	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
hvu-r.1	123426814	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
hvu-r.1	123395059	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
sbi-r.1	8078786	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
sbi-r.1	8060891	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
sbi-r.1	8063560	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
bdi-r.1	100844608	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
bdi-r.1	100839164	serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B'
cre-r.1	CHLRE_13g567800v5	uncharacterized protein

Top 50 coexpressed genes to 107932057 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107932057 (ghi-r.1 coexpression data)

CoexMap"107932057"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi03015 [list] [network] mRNA surveillance pathway (365 genes)

ghi04382 [list] [network] Cornified envelope formation (106 genes)

GO BP

GO:0007165 [list] [network] signal transduction

(2209 genes)

IEA

GO CC

GO:0000159 [list] [network] protein phosphatase type 2A complex

(85 genes)

IEA

GO MF

GO:0019888 [list] [network] protein phosphatase regulator activity

(248 genes)

IEA

Protein

XP_016719482.2 [sequence] [blastp]
XP_016719483.2 [sequence] [blastp]
XP_016719484.2 [sequence] [blastp]
XP_016719485.2 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, chlo_mito 4, nucl 3, cyto_mito 2, chlo 2	(predict for XP_016719482.2)
mito 4, chlo_mito 4, nucl 3, cyto_mito 2, chlo 2	(predict for XP_016719483.2)
mito 4, chlo_mito 4, nucl 3, cyto_mito 2, chlo 2	(predict for XP_016719484.2)
mito 4, chlo_mito 4, nucl 3, cyto_mito 2, chlo 2	(predict for XP_016719485.2)

Subcellular
localization
TargetP

other 4	(predict for XP_016719482.2)
other 4	(predict for XP_016719483.2)
other 4	(predict for XP_016719484.2)
other 4	(predict for XP_016719485.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107932057	ghi-r.1 for 107909758	ghi-r.1 for 107912637	ghi-r.1 for 107886802	ath-u.5 for ATB' ALPHA	ath-u.5 for AT1G13460	ath-u.5 for AT5G25510	bra-r.6 for 103869158	bra-r.6 for 103859278	bra-r.6 for 103854746	bna-r.1 for 125580230	bna-r.1 for 125608792	bna-r.1 for 111214244	cit-r.1 for 102606617	cit-r.1 for 102607694	cit-r.1 for 102612189	gma-u.5 for 100806230	gma-u.5 for 100807697	vvi-u.5 for 100253747	vvi-u.5 for 100252451	vvi-u.5 for 100258598	ppo-u.5 for 7496643	ppo-u.5 for 7480937	ppo-u.5 for 7477048	mtr-u.5 for 11429629	mtr-u.5 for 11431523	mtr-u.5 for 11432697	sly-u.5 for 101250942	sly-u.5 for 101257170	sly-u.5 for 101268818	sot-r.1 for 102581890	sot-r.1 for 102601978	sot-r.1 for 102600904	nta-r.1 for 107791655	nta-r.1 for 107798431	nta-r.1 for 107798666	osa-u.5 for 4337970	osa-u.5 for 4336207	osa-u.5 for 4334757	zma-u.5 for 100279581	zma-u.5 for 100280472	zma-u.5 for 100281610	tae-r.2 for 123114282	tae-r.2 for 123090678	tae-r.2 for 123053680	hvu-r.1 for 123449661	hvu-r.1 for 123426814	hvu-r.1 for 123395059	sbi-r.1 for 8078786	sbi-r.1 for 8060891	sbi-r.1 for 8063560	bdi-r.1 for 100844608	bdi-r.1 for 100839164	cre-r.1 for CHLRE_13g567800v5

Ortholog

Ortholog ID: 128

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*