ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107932772	probable beta-1,3-galactosyltransferase 4
ghi-r.1	107943237	probable beta-1,3-galactosyltransferase 4
ghi-r.1	107918123	probable beta-1,3-galactosyltransferase 4
ghi-r.1	107916640	probable beta-1,3-galactosyltransferase 2
ath-u.5	AT2G32430	Galactosyltransferase family protein
ath-u.5	AT4G26940	Galactosyltransferase family protein
ath-u.5	AT1G05170	Galactosyltransferase family protein
bra-r.6	103844168	probable beta-1,3-galactosyltransferase 2
bra-r.6	103867648	probable beta-1,3-galactosyltransferase 3
bra-r.6	103834828	probable beta-1,3-galactosyltransferase 4
bna-r.1	106451318	probable beta-1,3-galactosyltransferase 3
bna-r.1	106440493	probable beta-1,3-galactosyltransferase 3
bna-r.1	106401855	probable beta-1,3-galactosyltransferase 2
cit-r.1	102607994	probable beta-1,3-galactosyltransferase 2
cit-r.1	102629052	probable beta-1,3-galactosyltransferase 2
cit-r.1	102626490	probable beta-1,3-galactosyltransferase 2
gma-u.5	100793931	probable beta-1,3-galactosyltransferase 2
gma-u.5	100794838	probable beta-1,3-galactosyltransferase 2
gma-u.5	100810613	probable beta-1,3-galactosyltransferase 2
vvi-u.5	100259024	probable beta-1,3-galactosyltransferase 2
vvi-u.5	100264061	probable beta-1,3-galactosyltransferase 2
vvi-u.5	100263657	probable beta-1,3-galactosyltransferase 2
ppo-u.5	7468503	probable beta-1,3-galactosyltransferase 2
ppo-u.5	7458303	probable beta-1,3-galactosyltransferase 2
mtr-u.5	11413221	probable beta-1,3-galactosyltransferase 2
sly-u.5	101245676	probable beta-1,3-galactosyltransferase 2
sly-u.5	101254610	probable beta-1,3-galactosyltransferase 2
sly-u.5	101249433	probable beta-1,3-galactosyltransferase 2
sot-r.1	102590435	probable beta-1,3-galactosyltransferase 3
sot-r.1	102578966	probable beta-1,3-galactosyltransferase 2
sot-r.1	102586590	probable beta-1,3-galactosyltransferase 2
nta-r.1	107821488	putative beta-1,3-galactosyltransferase 2
nta-r.1	107828004	putative beta-1,3-galactosyltransferase 4
nta-r.1	107830280	putative beta-1,3-galactosyltransferase 2
osa-u.5	4328403	probable beta-1,3-galactosyltransferase 2
osa-u.5	4341851	probable beta-1,3-galactosyltransferase 2
osa-u.5	4333312	probable beta-1,3-galactosyltransferase 2
zma-u.5	100273113	putative beta-13-galactosyltransferase 4
zma-u.5	100282742	beta-1,3-galactosyltransferase sqv-2
zma-u.5	100216983	beta-1,3-galactosyltransferase sqv-2
tae-r.2	123160174	probable beta-1,3-galactosyltransferase 2
tae-r.2	123132393	probable beta-1,3-galactosyltransferase 2
tae-r.2	123136444	probable beta-1,3-galactosyltransferase 2
hvu-r.1	123402114	probable beta-1,3-galactosyltransferase 2
hvu-r.1	123410431	probable beta-1,3-galactosyltransferase 2
hvu-r.1	123411884	probable beta-1,3-galactosyltransferase 2
sbi-r.1	8076104	probable beta-1,3-galactosyltransferase 2
sbi-r.1	8083288	probable beta-1,3-galactosyltransferase 2
sbi-r.1	8063024	probable beta-1,3-galactosyltransferase 2
bdi-r.1	100823235	probable beta-1,3-galactosyltransferase 2
bdi-r.1	100822144	probable beta-1,3-galactosyltransferase 2
bdi-r.1	104585564	probable beta-1,3-galactosyltransferase 2

Top 50 coexpressed genes to 107932772 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107932772 (ghi-r.1 coexpression data)

CoexMap"107932772"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0000139 [list] [network] Golgi membrane

(243 genes)

IEA

GO MF

GO:0008378 [list] [network] galactosyltransferase activity

(66 genes)

IEA

Protein

XP_016720355.2 [sequence] [blastp]
XP_016720356.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, E.R. 2	(predict for XP_016720355.2)
cyto 7, E.R. 2	(predict for XP_016720356.2)

Subcellular
localization
TargetP

scret 7, other 3	(predict for XP_016720355.2)
scret 7, other 3	(predict for XP_016720356.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107932772	ghi-r.1 for 107943237	ghi-r.1 for 107918123	ghi-r.1 for 107916640	ath-u.5 for AT2G32430	ath-u.5 for AT4G26940	ath-u.5 for AT1G05170	bra-r.6 for 103844168	bra-r.6 for 103867648	bra-r.6 for 103834828	bna-r.1 for 106451318	bna-r.1 for 106440493	bna-r.1 for 106401855	cit-r.1 for 102607994	cit-r.1 for 102629052	cit-r.1 for 102626490	gma-u.5 for 100793931	gma-u.5 for 100794838	gma-u.5 for 100810613	vvi-u.5 for 100259024	vvi-u.5 for 100264061	vvi-u.5 for 100263657	ppo-u.5 for 7468503	ppo-u.5 for 7458303	mtr-u.5 for 11413221	sly-u.5 for 101245676	sly-u.5 for 101254610	sly-u.5 for 101249433	sot-r.1 for 102590435	sot-r.1 for 102578966	sot-r.1 for 102586590	nta-r.1 for 107821488	nta-r.1 for 107828004	nta-r.1 for 107830280	osa-u.5 for 4328403	osa-u.5 for 4341851	osa-u.5 for 4333312	zma-u.5 for 100273113	zma-u.5 for 100282742	zma-u.5 for 100216983	tae-r.2 for 123160174	tae-r.2 for 123132393	tae-r.2 for 123136444	hvu-r.1 for 123402114	hvu-r.1 for 123410431	hvu-r.1 for 123411884	sbi-r.1 for 8076104	sbi-r.1 for 8083288	sbi-r.1 for 8063024	bdi-r.1 for 100823235	bdi-r.1 for 100822144	bdi-r.1 for 104585564

Ortholog

Ortholog ID: 1914

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

probable beta-1,3-galactosyltransferase 4