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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107933407   proteasome subunit beta type-5 
 ghi-r.1   107916572   proteasome subunit beta type-5 
 ghi-r.1   107922441   proteasome subunit beta type-5 
 ghi-r.1   107898632   proteasome subunit beta type-5 
 ath-u.5   AT3G26340   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 
 ath-u.5   PBE1   20S proteasome beta subunit E1 
 bra-r.6   103843086   proteasome subunit beta type-5-B 
 bra-r.6   103871961   proteasome subunit beta type-5-B 
 bra-r.6   103836126   proteasome subunit beta type-5-B 
 bna-r.1   106362064   proteasome subunit beta type-5-B 
 bna-r.1   106396989   proteasome subunit beta type-5-B 
 bna-r.1   106411590   proteasome subunit beta type-5-B 
 cit-r.1   102624332   proteasome subunit beta type-5-like 
 gma-u.5   100779240   proteasome subunit beta type-5 
 gma-u.5   100778498   proteasome subunit beta type-5 
 vvi-u.5   100261458   proteasome subunit beta type-5 
 ppo-u.5   7480917   proteasome subunit beta type-5-B 
 ppo-u.5   7460023   proteasome subunit beta type-5-B 
 mtr-u.5   11418115   proteasome subunit beta type-5 
 sly-u.5   101250118   proteasome subunit beta type-5 
 sot-r.1   102582954   proteasome subunit beta type-5-like 
 sot-r.1   102600772   proteasome subunit beta type-5-like 
 nta-r.1   107831212   proteasome subunit beta type-5-like 
 nta-r.1   107826209   proteasome subunit beta type-5 
 nta-r.1   107817858   proteasome subunit beta type-5 
 osa-u.5   4340166   proteasome subunit beta type-5-A 
 zma-u.5   100194311   uncharacterized LOC100194311 
 tae-r.2   123151086   proteasome subunit beta type-5-A 
 tae-r.2   123166869   proteasome subunit beta type-5-A 
 tae-r.2   543170   proteasome subunit beta type-5-A 
 hvu-r.1   123452896   proteasome subunit beta type-5-A-like 
 hvu-r.1   123407332   proteasome subunit beta type-5-A-like 
 sbi-r.1   8069165   proteasome subunit beta type-5-A 
 bdi-r.1   100836232   proteasome subunit beta type-5-A 
 cre-r.1   CHLRE_10g461950v5   uncharacterized protein 

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Top 50 coexpressed genes to 107933407 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107933407 (ghi-r.1 coexpression data)

CoexMap"107933407"


ghiLOC107933407 | Entrez gene ID : 107933407    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 2 1 2 1 1 2 3 1 1 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03050 [list] [network] Proteasome (162 genes)
GO BP
GO:0051603 [list] [network] proteolysis involved in protein catabolic process  (1058 genes)  IEA  
GO CC
GO:0005839 [list] [network] proteasome core complex  (69 genes)  IEA  
GO MF
GO:0004298 [list] [network] threonine-type endopeptidase activity  (18 genes)  IEA  
Protein XP_016721105.2 [sequence] [blastp]
Subcellular
localization
wolf
cysk 8,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1  (predict for XP_016721105.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016721105.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107933407
ghi-r.1
for
107916572
ghi-r.1
for
107922441
ghi-r.1
for
107898632
ath-u.5
for
AT3G26340
ath-u.5
for
PBE1
bra-r.6
for
103843086
bra-r.6
for
103871961
bra-r.6
for
103836126
bna-r.1
for
106362064
bna-r.1
for
106396989
bna-r.1
for
106411590
cit-r.1
for
102624332
gma-u.5
for
100779240
gma-u.5
for
100778498
vvi-u.5
for
100261458
ppo-u.5
for
7480917
ppo-u.5
for
7460023
mtr-u.5
for
11418115
sly-u.5
for
101250118
sot-r.1
for
102582954
sot-r.1
for
102600772
nta-r.1
for
107831212
nta-r.1
for
107826209
nta-r.1
for
107817858
osa-u.5
for
4340166
zma-u.5
for
100194311
tae-r.2
for
123151086
tae-r.2
for
123166869
tae-r.2
for
543170
hvu-r.1
for
123452896
hvu-r.1
for
123407332
sbi-r.1
for
8069165
bdi-r.1
for
100836232
cre-r.1
for
CHLRE_10g461950v5


Ortholog ID: 5119
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma vvi ppo ppo mtr sly sot sot nta nta nta osa zma tae tae tae hvu hvu sbi bdi cre
Symbol LOC107916572 LOC107922441 LOC107898632 AT3G26340 PBE1 LOC103843086 LOC103871961 LOC103836126 LOC106396989 LOC106411590 LOC106382363 LOC102624332 LOC100779240 LOC100778498 LOC100261458 LOC7480917 LOC7460023 LOC11418115 LOC101250118 LOC102582954 LOC102600772 LOC107831212 LOC107826209 LOC107817858 LOC4340166 LOC100194311 LOC123151086 LOC123166869 LOC543170 LOC123452896 LOC123407332 LOC8069165 LOC100836232 CHLRE_10g461950v5
Function* proteasome subunit beta type-5 proteasome subunit beta type-5 proteasome subunit beta type-5 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 20S proteasome beta subunit E1 proteasome subunit beta type-5-B proteasome subunit beta type-5-B proteasome subunit beta type-5-B proteasome subunit beta type-5-B proteasome subunit beta type-5-B proteasome subunit beta type-5-B proteasome subunit beta type-5-like proteasome subunit beta type-5 proteasome subunit beta type-5 proteasome subunit beta type-5 proteasome subunit beta type-5-B proteasome subunit beta type-5-B proteasome subunit beta type-5 proteasome subunit beta type-5 proteasome subunit beta type-5-like proteasome subunit beta type-5-like proteasome subunit beta type-5-like proteasome subunit beta type-5 proteasome subunit beta type-5 proteasome subunit beta type-5-A uncharacterized LOC100194311 proteasome subunit beta type-5-A proteasome subunit beta type-5-A proteasome subunit beta type-5-A proteasome subunit beta type-5-A-like proteasome subunit beta type-5-A-like proteasome subunit beta type-5-A proteasome subunit beta type-5-A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi03020 RNA polymerase 3
ghi03420 Nucleotide excision repair 3
ghi04122 Sulfur relay system 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi03020 RNA polymerase 3
ghi03420 Nucleotide excision repair 3
ghi04122 Sulfur relay system 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 15
cit00190 Oxidative phosphorylation 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 16
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 10
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
mtr00190 Oxidative phosphorylation 3
mtr03420 Nucleotide excision repair 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 16
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 7
tae04016 MAPK signaling pathway - plant 2
tae04075 Plant hormone signal transduction 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 13
tae04016 MAPK signaling pathway - plant 2
tae04075 Plant hormone signal transduction 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 13
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107916572 107922441 107898632 822238 837863 103843086 103871961 103836126 106396989 106411590 106382363 102624332 100779240 100778498 100261458 7480917 7460023 11418115 101250118 102582954 102600772 107831212 107826209 107817858 4340166 100194311 123151086 123166869 543170 123452896 123407332 8069165 100836232 5723976
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