ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107933461	uncharacterized LOC107933461
ghi-r.1	107946839	uncharacterized LOC107946839
ghi-r.1	107900694	uncharacterized LOC107900694
ath-u.5	EMB3006	embryo defective 3006
bra-r.6	103857288	uncharacterized LOC103857288
bna-r.1	BNAC01G11660D	uncharacterized BNAC01G11660D
bna-r.1	111210435	uncharacterized LOC111210435
cit-r.1	102612581	uncharacterized LOC102612581
gma-u.5	100786747	uncharacterized LOC100786747
gma-u.5	100305953	uncharacterized LOC100305953
vvi-u.5	100854852	uncharacterized LOC100854852
ppo-u.5	18098424	uncharacterized LOC18098424
mtr-u.5	11440553	uncharacterized LOC11440553
sly-u.5	101261700	uncharacterized LOC101261700
sot-r.1	102589289	uncharacterized LOC102589289
nta-r.1	107828449	uncharacterized LOC107828449
nta-r.1	107767832	uncharacterized LOC107767832
osa-u.5	4344732	uncharacterized LOC4344732
zma-u.5	100276012	uncharacterized LOC100276012
tae-r.2	123122705	uncharacterized LOC123122705
tae-r.2	123104891	uncharacterized LOC123104891
tae-r.2	123113179	uncharacterized LOC123113179
hvu-r.1	123452088	uncharacterized LOC123452088
sbi-r.1	8069643	uncharacterized LOC8069643
bdi-r.1	100831753	uncharacterized LOC100831753

Annotation

functional annotation

KEGG

GO BP

GO:0007059 [list] [network] chromosome segregation

(212 genes)

IEA

GO CC

GO:0000444 [list] [network] MIS12/MIND type complex

(4 genes)

IEA

GO MF

Protein

XP_016721163.1 [sequence] [blastp]

Subcellular
localization
wolf

pero 4, nucl 2, chlo 1, mito 1, cyto_nucl 1, chlo_mito 1

(predict for XP_016721163.1)

Subcellular
localization
TargetP

other 7

(predict for XP_016721163.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107933461	ghi-r.1 for 107946839	ghi-r.1 for 107900694	ath-u.5 for EMB3006	bra-r.6 for 103857288	bna-r.1 for BNAC01G11660D	bna-r.1 for 111210435	cit-r.1 for 102612581	gma-u.5 for 100786747	gma-u.5 for 100305953	vvi-u.5 for 100854852	ppo-u.5 for 18098424	mtr-u.5 for 11440553	sly-u.5 for 101261700	sot-r.1 for 102589289	nta-r.1 for 107828449	nta-r.1 for 107767832	osa-u.5 for 4344732	zma-u.5 for 100276012	tae-r.2 for 123122705	tae-r.2 for 123104891	tae-r.2 for 123113179	hvu-r.1 for 123452088	sbi-r.1 for 8069643	bdi-r.1 for 100831753

Ortholog

Ortholog ID: 10197

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

EMB3006

Function^*

uncharacterized LOC107933461

uncharacterized LOC107946839

uncharacterized LOC107900694

embryo defective 3006

uncharacterized LOC103857288

uncharacterized BNAC01G11660D

uncharacterized LOC111210435

uncharacterized LOC102612581

uncharacterized LOC100786747

uncharacterized LOC100305953

uncharacterized LOC100854852

uncharacterized LOC18098424

uncharacterized LOC11440553

uncharacterized LOC101261700

uncharacterized LOC102589289

uncharacterized LOC107828449

uncharacterized LOC107767832

uncharacterized LOC4344732

uncharacterized LOC100276012

uncharacterized LOC123122705

uncharacterized LOC123104891

uncharacterized LOC123113179

uncharacterized LOC123452088

uncharacterized LOC8069643

uncharacterized LOC100831753

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	4
ghi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	4
ghi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00790	Folate biosynthesis	3
ghi01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03020	RNA polymerase	2
ath03420	Nucleotide excision repair	2
ath04136	Autophagy - other	2
ath04145	Phagosome	2
ath04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	4
bra04142	Lysosome	2
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	4
bna03420	Nucleotide excision repair	4
bna00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	2
bna03420	Nucleotide excision repair	2
bna03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	8
gma03420	Nucleotide excision repair	4
gma03430	Mismatch repair	3
gma03440	Homologous recombination	2
gma03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	7
gma00240	Pyrimidine metabolism	3
gma01232	Nucleotide metabolism	3
gma03420	Nucleotide excision repair	3
gma03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03460	Fanconi anemia pathway	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	12
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03440	Homologous recombination	3
sly03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	3
sot00230	Purine metabolism	2
sot00240	Pyrimidine metabolism	2
sot00480	Glutathione metabolism	2
sot01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00240	Pyrimidine metabolism	3
tae01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03030	DNA replication	3
tae03410	Base excision repair	3
tae03450	Non-homologous end-joining	3
tae00510	N-Glycan biosynthesis	3
tae00513	Various types of N-glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	6
tae00240	Pyrimidine metabolism	3
tae01232	Nucleotide metabolism	3
tae00510	N-Glycan biosynthesis	3
tae00513	Various types of N-glycan biosynthesis	3

Expression

Expression pattern

Entrez Gene ID^*

107933461

107946839

107900694

827676

103857288

106374934

111210435

102612581

100786747

100305953

100854852

18098424

11440553

101261700

102589289

107828449

107767832

4344732

100276012

123122705

123104891

123113179

123452088

8069643

100831753

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107933461 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107933461 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	1	2	1	2	1	1	1	1	1	2	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107933461 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107933461 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**