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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107934634   ethylene-responsive transcription factor ERF003 
 ath-u.5   ESE3   Integrase-type DNA-binding superfamily protein 
 vvi-u.5   100255943   ethylene-responsive transcription factor ERF003-like 
 vvi-u.5   100252609   protein PPLZ02 
 ppo-u.5   7478292   ethylene-responsive transcription factor ERF003 
 ppo-u.5   7496055   ethylene-responsive transcription factor ERF003 
 ppo-u.5   7458406   ethylene-responsive transcription factor ERF003 
 mtr-u.5   25491289   ethylene-responsive transcription factor ERF003 
 mtr-u.5   11427311   protein PPLZ02 
 sly-u.5   ERF-H1   ethylene response factor H.1 
 sly-u.5   ERF-H2   ethylene response factor H.2 
 osa-u.5   4331013   ethylene-responsive transcription factor ERF003 
 osa-u.5   4340313   ethylene-responsive transcription factor ERF003 
 zma-u.5   103654172   ethylene-responsive transcription factor ERF003 
 zma-u.5   100285966   ethylene response factor 1 

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Top 50 coexpressed genes to 107934634 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107934634 (ghi-r.1 coexpression data)

CoexMap"107934634"


ghiLOC107934634 | Entrez gene ID : 107934634    
Species ghi ath vvi ppo mtr sly osa zma bdi hvu bra cit gma bna sbi sot nta cre tae
Paralog 1 1 2 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_016722599.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  nucl_plas 5,  chlo 1,  cyto 1,  plas 1  (predict for XP_016722599.1)
Subcellular
localization
TargetP
scret 7,  chlo 3  (predict for XP_016722599.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107934634
ath-u.5
for
ESE3
vvi-u.5
for
100255943
vvi-u.5
for
100252609
ppo-u.5
for
7478292
ppo-u.5
for
7496055
ppo-u.5
for
7458406
mtr-u.5
for
25491289
mtr-u.5
for
11427311
sly-u.5
for
ERF-H1
sly-u.5
for
ERF-H2
osa-u.5
for
4331013
osa-u.5
for
4340313
zma-u.5
for
103654172
zma-u.5
for
100285966


Ortholog ID: 1590
Species ghi ath bra bra bna cit gma vvi ppo ppo mtr mtr sly sot sot nta nta osa osa zma zma bdi
Symbol LOC107906850 ESE3 LOC103874385 LOC103837082 LOC106399255 LOC102619724 LOC100527365 LOC100252609 LOC7478292 LOC7458406 LOC25491289 LOC11427311 ERF-H2 LOC102579231 LOC102602553 LOC107785757 LOC107830371 LOC4331013 LOC4340313 LOC100285966 LOC103654172 LOC100825990
Function* protein PPLZ02 Integrase-type DNA-binding superfamily protein ethylene-responsive transcription factor ERF003 ethylene-responsive transcription factor ERF003 ethylene-responsive transcription factor ERF003-like ethylene-responsive transcription factor ERF003 uncharacterized LOC100527365 protein PPLZ02 ethylene-responsive transcription factor ERF003 ethylene-responsive transcription factor ERF003 ethylene-responsive transcription factor ERF003 protein PPLZ02 ethylene response factor H.2 ethylene-responsive transcription factor ERF003 ethylene-responsive transcription factor ERF003-like ethylene-responsive transcription factor ERF003-like ethylene-responsive transcription factor ERF003 ethylene-responsive transcription factor ERF003 ethylene-responsive transcription factor ERF003 ethylene response factor 1 ethylene-responsive transcription factor ERF003 ethylene-responsive transcription factor ERF003
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00053 Ascorbate and aldarate metabolism 3
sot00520 Amino sugar and nucleotide sugar metabolism 3
sot01240 Biosynthesis of cofactors 3
sot01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107906850 832590 103874385 103837082 106399255 102619724 100527365 100252609 7478292 7458406 25491289 11427311 101266647 102579231 102602553 107785757 107830371 4331013 4340313 100285966 103654172 100825990
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