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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107935052   biogenesis of lysosome-related organelles complex 1 subunit 1 
 ghi-r.1   107927108   biogenesis of lysosome-related organelles complex 1 subunit 1 
 ath-u.5   BLOS1   GCN5L1 family protein 
 bra-r.6   103857309   biogenesis of lysosome-related organelles complex 1 subunit 1 
 bna-r.1   106437595   biogenesis of lysosome-related organelles complex 1 subunit 1 
 bna-r.1   106387878   biogenesis of lysosome-related organelles complex 1 subunit 1 
 cit-r.1   102614895   biogenesis of lysosome-related organelles complex 1 subunit 1 
 gma-u.5   100305965   biogenesis of lysosome-related organelles complex 1 subunit 1-like 
 vvi-u.5   100251874   biogenesis of lysosome-related organelles complex 1 subunit 1 
 mtr-u.5   11426648   biogenesis of lysosome-related organelles complex 1 subunit 1 
 sly-u.5   101259909   biogenesis of lysosome-related organelles complex 1 subunit 1 
 sot-r.1   102604585   biogenesis of lysosome-related organelles complex 1 subunit 1 
 nta-r.1   107809990   biogenesis of lysosome-related organelles complex 1 subunit 1-like 
 nta-r.1   107808423   biogenesis of lysosome-related organelles complex 1 subunit 1 
 zma-u.5   100280303   uncharacterized LOC100280303 
 tae-r.2   123115982   biogenesis of lysosome-related organelles complex 1 subunit 1 
 tae-r.2   123103178   biogenesis of lysosome-related organelles complex 1 subunit 1 
 tae-r.2   123124580   biogenesis of lysosome-related organelles complex 1 subunit 1 
 hvu-r.1   123398448   biogenesis of lysosome-related organelles complex 1 subunit 1 
 sbi-r.1   8080001   biogenesis of lysosome-related organelles complex 1 subunit 1 
 bdi-r.1   100829442   biogenesis of lysosome-related organelles complex 1 subunit 1 
 cre-r.1   CHLRE_01g021000v5   uncharacterized protein 

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Top 50 coexpressed genes to 107935052 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107935052 (ghi-r.1 coexpression data)

CoexMap"107935052"


ghiLOC107935052 | Entrez gene ID : 107935052    
Species ghi ath bra bna cit gma vvi mtr sly sot nta zma tae hvu sbi bdi cre osa ppo
Paralog 2 1 1 2 1 1 1 1 1 1 2 1 3 1 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016197 [list] [network] endosomal transport  (199 genes)  IEA  
GO CC
GO:0031083 [list] [network] BLOC-1 complex  (4 genes)  IEA  
GO MF
Protein XP_016723084.1 [sequence] [blastp]
XP_016723085.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto_nucl 4,  cyto 2,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for XP_016723084.1)
nucl 5,  cyto_nucl 4,  cyto 2,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for XP_016723085.1)
Subcellular
localization
TargetP
mito 4,  other 4  (predict for XP_016723084.1)
mito 4,  other 4  (predict for XP_016723085.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107935052
ghi-r.1
for
107927108
ath-u.5
for
BLOS1
bra-r.6
for
103857309
bna-r.1
for
106437595
bna-r.1
for
106387878
cit-r.1
for
102614895
gma-u.5
for
100305965
vvi-u.5
for
100251874
mtr-u.5
for
11426648
sly-u.5
for
101259909
sot-r.1
for
102604585
nta-r.1
for
107809990
nta-r.1
for
107808423
zma-u.5
for
100280303
tae-r.2
for
123115982
tae-r.2
for
123103178
tae-r.2
for
123124580
hvu-r.1
for
123398448
sbi-r.1
for
8080001
bdi-r.1
for
100829442
cre-r.1
for
CHLRE_01g021000v5


Ortholog ID: 9407
Species ghi ghi ath bra bna bna cit gma vvi mtr sly sot nta nta zma tae tae tae hvu sbi bdi cre
Symbol LOC107935052 LOC107927108 BLOS1 LOC103857309 LOC106437595 LOC106387878 LOC102614895 LOC100305965 LOC100251874 LOC11426648 LOC101259909 LOC102604585 LOC107809990 LOC107808423 LOC100280303 LOC123115982 LOC123103178 LOC123124580 LOC123398448 LOC8080001 LOC100829442 CHLRE_01g021000v5
Function* biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1 GCN5L1 family protein biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1-like biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1-like biogenesis of lysosome-related organelles complex 1 subunit 1 uncharacterized LOC100280303 biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1 biogenesis of lysosome-related organelles complex 1 subunit 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00730 Thiamine metabolism 2
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna00730 Thiamine metabolism 2
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 4
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00260 Glycine, serine and threonine metabolism 2
gma01230 Biosynthesis of amino acids 2
gma04144 Endocytosis 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00020 Citrate cycle (TCA cycle) 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107935052 107927108 817583 103857309 106437595 106387878 102614895 100305965 100251874 11426648 101259909 102604585 107809990 107808423 100280303 123115982 123103178 123124580 123398448 8080001 100829442 5715203
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