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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107935517   two-component response regulator ORR10 
 ghi-r.1   107905020   two-component response regulator ORR4 
 ghi-r.1   107904842   two-component response regulator ARR17 
 ghi-r.1   107890909   two-component response regulator ARR6 
 ath-u.5   ARR4   response regulator 4 
 ath-u.5   ARR15   response regulator 15 
 ath-u.5   ARR3   response regulator 3 
 bra-r.6   103874727   two-component response regulator ARR6 
 bra-r.6   103872707   two-component response regulator ARR7 
 bra-r.6   103874162   two-component response regulator ARR5 
 bna-r.1   125580867   two-component response regulator ARR5 
 bna-r.1   125586899   two-component response regulator ARR8-like 
 cit-r.1   102607514   two-component response regulator ORR10 
 cit-r.1   102610311   two-component response regulator ARR17 
 gma-u.5   100788079   two-component response regulator ARR9-like 
 gma-u.5   100796843   two-component response regulator ARR5 
 vvi-u.5   100243627   two-component response regulator ARR9 
 vvi-u.5   100253216   two-component response regulator ORR9 
 ppo-u.5   7464108   two-component response regulator ARR8 
 ppo-u.5   7462788   two-component response regulator ORR9-like 
 mtr-u.5   11407969   two-component response regulator ARR5 
 mtr-u.5   25489576   two-component response regulator ARR5 
 sly-u.5   101248398   two-component response regulator ARR17-like 
 sly-u.5   101253384   two-component response regulator ARR17 
 sly-u.5   101265701   two-component response regulator ORR3-like 
 sot-r.1   102602758   two-component response regulator ARR5-like 
 sot-r.1   102605280   two-component response regulator ARR5 
 nta-r.1   107806182   two-component response regulator ARR17 
 nta-r.1   107776522   two-component response regulator ORR3-like 
 nta-r.1   107774820   two-component response regulator ARR17 
 osa-u.5   4331245   two-component response regulator ORR3 
 zma-u.5   103643345   two-component response regulator ORR12 
 zma-u.5   100191253   uncharacterized LOC100191253 
 zma-u.5   100283359   two-component response regulator ARR3 
 tae-r.2   123043453   uncharacterized LOC123043453 
 tae-r.2   123047346   two-component response regulator ORR6 
 hvu-r.1   123406064   two-component response regulator ORR3-like 
 hvu-r.1   123400001   two-component response regulator ORR9-like 
 sbi-r.1   110435576   two-component response regulator ORR9-like 
 sbi-r.1   8056258   two-component response regulator ORR3 
 bdi-r.1   100845507   two-component response regulator ORR11 
 bdi-r.1   100843689   two-component response regulator ORR2 
 bdi-r.1   100823631   two-component response regulator ORR5 
 cre-r.1   CHLRE_02g094150v5   uncharacterized protein 
 cre-r.1   CHLRE_11g469400v5   uncharacterized protein 

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Top 50 coexpressed genes to 107935517 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107935517 (ghi-r.1 coexpression data)

CoexMap"107935517"


ghiLOC107935517 | Entrez gene ID : 107935517    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 2 2 2 2 2 2 3 2 3 1 3 2 2 2 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04075 [list] [network] Plant hormone signal transduction (1215 genes)
GO BP
GO:0009736 [list] [network] cytokinin-activated signaling pathway  (133 genes)  IEA  
GO:0000160 [list] [network] phosphorelay signal transduction system  (327 genes)  IEA  
GO CC
GO MF
Protein XP_016723620.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cysk 2,  cyto_pero 2,  cyto_plas 2  (predict for XP_016723620.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016723620.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107935517
ghi-r.1
for
107905020
ghi-r.1
for
107904842
ghi-r.1
for
107890909
ath-u.5
for
ARR4
ath-u.5
for
ARR15
ath-u.5
for
ARR3
bra-r.6
for
103874727
bra-r.6
for
103872707
bra-r.6
for
103874162
bna-r.1
for
125580867
bna-r.1
for
125586899
cit-r.1
for
102607514
cit-r.1
for
102610311
gma-u.5
for
100788079
gma-u.5
for
100796843
vvi-u.5
for
100243627
vvi-u.5
for
100253216
ppo-u.5
for
7464108
ppo-u.5
for
7462788
mtr-u.5
for
11407969
mtr-u.5
for
25489576
sly-u.5
for
101248398
sly-u.5
for
101253384
sly-u.5
for
101265701
sot-r.1
for
102602758
sot-r.1
for
102605280
nta-r.1
for
107806182
nta-r.1
for
107776522
nta-r.1
for
107774820
osa-u.5
for
4331245
zma-u.5
for
103643345
zma-u.5
for
100191253
zma-u.5
for
100283359
tae-r.2
for
123043453
tae-r.2
for
123047346
hvu-r.1
for
123406064
hvu-r.1
for
123400001
sbi-r.1
for
110435576
sbi-r.1
for
8056258
bdi-r.1
for
100845507
bdi-r.1
for
100843689
bdi-r.1
for
100823631
cre-r.1
for
CHLRE_02g094150v5
cre-r.1
for
CHLRE_11g469400v5


Ortholog ID: 123
Species ghi ghi ghi ath ath ath bra bra bna cit cit gma gma gma vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot sot nta osa zma zma zma tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre cre
Symbol LOC121207568 LOC107924248 LOC121208067 ARR3 ARR9 RR3 LOC103865872 LOC103863065 LOC106394624 LOC102614357 LOC102609171 LOC100801334 LOC100786187 LOC100305926 LOC100253216 LOC100242967 LOC7469072 LOC7476846 LOC11407969 LOC25499969 LOC11444544 LOC101253384 LOC101265701 LOC101248058 LOC102602758 LOC102588738 LOC102590336 LOC107776522 LOC4349747 LOC100191253 LOC100273679 LOC103653387 LOC123055148 LOC123080746 LOC123400001 LOC123428384 LOC123445539 LOC8068884 LOC8077366 LOC100830988 LOC100834563 LOC100839190 CHLRE_02g094150v5 CHLRE_11g469400v5
Function* two-component response regulator ARR17 two-component response regulator ORR4 two-component response regulator ARR17 response regulator 3 response regulator 9 response regulator 3 two-component response regulator ARR8 two-component response regulator ARR9 two-component response regulator ARR8-like two-component response regulator ARR6 two-component response regulator ORR9-like two-component response regulator ORR9 two-component response regulator ORR9 uncharacterized LOC100305926 two-component response regulator ORR9 two-component response regulator ORR9 two-component response regulator ARR5 two-component response regulator ARR8 two-component response regulator ARR5 two-component response regulator ARR9 two-component response regulator ARR8 two-component response regulator ARR17 two-component response regulator ORR3-like two-component response regulator ORR9 two-component response regulator ARR5-like two-component response regulator ORR9-like two-component response regulator ORR10-like two-component response regulator ORR3-like two-component response regulator ORR9 uncharacterized LOC100191253 two-component response regulator ARR3 uncharacterized LOC103653387 two-component response regulator ORR6 two-component response regulator ORR4 two-component response regulator ORR9-like two-component response regulator ORR6-like two-component response regulator ORR4-like two-component response regulator ORR2 two-component response regulator ORR4 two-component response regulator ORR9 two-component response regulator ORR6 two-component response regulator ORR4 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 8
ath00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00053 Ascorbate and aldarate metabolism 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 8
gma00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 10
gma00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 7
mtr00230 Purine metabolism 2
mtr01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 6
mtr00790 Folate biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr01240 Biosynthesis of cofactors 3
mtr00910 Nitrogen metabolism 3
mtr01310 Nitrogen cycle 3
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 9
sly00908 Zeatin biosynthesis 3
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 8
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 9
sly00908 Zeatin biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 13
nta00908 Zeatin biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 7
osa00908 Zeatin biosynthesis 2
osa00230 Purine metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 7
zma00230 Purine metabolism 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00062 Fatty acid elongation 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 12
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03040 Spliceosome 2
tae03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 8
sbi00230 Purine metabolism 2
sbi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 8
sbi00230 Purine metabolism 2
sbi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 6
bdi00230 Purine metabolism 2
bdi01232 Nucleotide metabolism 2
bdi00010 Glycolysis / Gluconeogenesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121207568 107924248 121208067 842288 824871 818730 103865872 103863065 106394624 102614357 102609171 100801334 100786187 100305926 100253216 100242967 7469072 7476846 11407969 25499969 11444544 101253384 101265701 101248058 102602758 102588738 102590336 107776522 4349747 100191253 100273679 103653387 123055148 123080746 123400001 123428384 123445539 8068884 8077366 100830988 100834563 100839190 5727530 66055301
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