ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107935982	uncharacterized LOC107935982
ghi-r.1	107903976	uncharacterized LOC107903976
ath-u.5	AT5G01010	retinal-binding protein
bra-r.6	103855392	uncharacterized LOC103855392
bra-r.6	103850397	uncharacterized LOC103850397
bna-r.1	106427001	uncharacterized LOC106427001
bna-r.1	106452469	uncharacterized LOC106452469
bna-r.1	106431804	uncharacterized LOC106431804
cit-r.1	102624894	uncharacterized LOC102624894
gma-u.5	100795582	uncharacterized LOC100795582
gma-u.5	100778827	uncharacterized LOC100778827
vvi-u.5	100243295	uncharacterized LOC100243295
ppo-u.5	7472506	uncharacterized LOC7472506
mtr-u.5	11437022	uncharacterized LOC11437022
sly-u.5	101255446	uncharacterized LOC101255446
sot-r.1	102585892	uncharacterized LOC102585892
nta-r.1	107813275	uncharacterized LOC107813275
nta-r.1	107831620	uncharacterized LOC107831620
osa-u.5	4338367	uncharacterized LOC4338367
zma-u.5	103630158	uncharacterized LOC103630158
tae-r.2	123172094	uncharacterized LOC123172094
tae-r.2	123176466	uncharacterized LOC123176466
tae-r.2	123118533	uncharacterized LOC123118533
hvu-r.1	123428985	uncharacterized LOC123428985
sbi-r.1	8066757	uncharacterized LOC8066757
bdi-r.1	100826543	uncharacterized LOC100826543
cre-r.1	CHLRE_02g117950v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016724105.2 [sequence] [blastp]
XP_040943244.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, cyto 3, nucl 1, mito 1	(predict for XP_016724105.2)
cyto 4, chlo 4, nucl 1, mito 1, extr 1	(predict for XP_040943244.1)

Subcellular
localization
TargetP

other 6	(predict for XP_016724105.2)
other 6	(predict for XP_040943244.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107935982	ghi-r.1 for 107903976	ath-u.5 for AT5G01010	bra-r.6 for 103855392	bra-r.6 for 103850397	bna-r.1 for 106427001	bna-r.1 for 106452469	bna-r.1 for 106431804	cit-r.1 for 102624894	gma-u.5 for 100795582	gma-u.5 for 100778827	vvi-u.5 for 100243295	ppo-u.5 for 7472506	mtr-u.5 for 11437022	sly-u.5 for 101255446	sot-r.1 for 102585892	nta-r.1 for 107813275	nta-r.1 for 107831620	osa-u.5 for 4338367	zma-u.5 for 103630158	tae-r.2 for 123172094	tae-r.2 for 123176466	tae-r.2 for 123118533	hvu-r.1 for 123428985	sbi-r.1 for 8066757	bdi-r.1 for 100826543	cre-r.1 for CHLRE_02g117950v5

Ortholog

Ortholog ID: 8610

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107935982

uncharacterized LOC107903976

retinal-binding protein

uncharacterized LOC103855392

uncharacterized LOC103850397

uncharacterized LOC106427001

uncharacterized LOC106452469

uncharacterized LOC106431804

uncharacterized LOC102624894

uncharacterized LOC100795582

uncharacterized LOC100778827

uncharacterized LOC100243295

uncharacterized LOC7472506

uncharacterized LOC11437022

uncharacterized LOC101255446

uncharacterized LOC102585892

uncharacterized LOC107813275

uncharacterized LOC107831620

uncharacterized LOC4338367

uncharacterized LOC103630158

uncharacterized LOC123176466

uncharacterized LOC123118533

uncharacterized LOC123172092

uncharacterized LOC123428985

uncharacterized LOC8066757

uncharacterized LOC100826543

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2
ghi00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2
ghi00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	2
bra04518	Integrin signaling	2
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03018	RNA degradation	3
cit00710	Carbon fixation by Calvin cycle	3
cit01200	Carbon metabolism	3
cit00620	Pyruvate metabolism	2
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	3
gma03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	3
ppo04144	Endocytosis	2
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	3
sot00564	Glycerophospholipid metabolism	2
sot00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	4
nta01200	Carbon metabolism	4
nta01230	Biosynthesis of amino acids	4
nta00051	Fructose and mannose metabolism	3
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01200	Carbon metabolism	5
nta01230	Biosynthesis of amino acids	5
nta00010	Glycolysis / Gluconeogenesis	4
nta00051	Fructose and mannose metabolism	4
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00564	Glycerophospholipid metabolism	2
osa00565	Ether lipid metabolism	2
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03250	Viral life cycle - HIV-1	2
zma03272	Virion - Hepatitis viruses	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
tae00999	Biosynthesis of various plant secondary metabolites	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
tae00999	Biosynthesis of various plant secondary metabolites	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00071	Fatty acid degradation	2
hvu00592	alpha-Linolenic acid metabolism	2
hvu01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	4

Expression

Expression pattern

Entrez Gene ID^*

107935982

107903976

831893

103855392

103850397

106427001

106452469

106431804

102624894

100795582

100778827

100243295

7472506

11437022

101255446

102585892

107813275

107831620

4338367

103630158

123176466

123118533

123172092

123428985

8066757

100826543

5727992

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107935982 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107935982 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	2	3	1	2	1	1	1	1	1	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107935982 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107935982 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**