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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107936212   F-box protein SKIP5 
 ghi-r.1   107939262   F-box protein SKIP5 
 ghi-r.1   107936210   F-box protein SKIP5 
 ath-u.5   SKIP5   SKP1/ASK-interacting protein 5 
 bra-r.6   103841358   F-box protein SKIP5 
 bna-r.1   106445467   F-box protein SKIP5 
 bna-r.1   106431354   F-box protein SKIP5-like 
 bna-r.1   106416327   F-box protein SKIP5-like 
 cit-r.1   127902735   F-box protein SKIP5-like 
 cit-r.1   102625599   F-box protein SKIP5 
 gma-u.5   100808414   F-box protein SKIP5-like 
 vvi-u.5   100256604   F-box protein SKIP5 
 ppo-u.5   112328195   F-box protein SKIP5 
 mtr-u.5   11421143   F-box protein SKIP5 
 sly-u.5   543829   SKIP5-like protein 
 sot-r.1   102590429   F-box protein SKIP5 
 nta-r.1   107815974   F-box protein SKIP5 
 nta-r.1   107762935   F-box protein SKIP5 
 osa-u.5   4344171   F-box protein SKIP5 
 zma-u.5   103633528   F-box protein SKIP5 
 tae-r.2   123043861   F-box protein SKIP5 
 tae-r.2   123051735   F-box protein SKIP5 
 tae-r.2   123187642   F-box protein SKIP5 
 hvu-r.1   123424896   F-box protein SKIP5 
 sbi-r.1   8072254   F-box protein SKIP5 
 bdi-r.1   100825770   F-box protein SKIP5 

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Top 50 coexpressed genes to 107936212 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107936212 (ghi-r.1 coexpression data)

CoexMap"107936212"


ghiLOC107936212 | Entrez gene ID : 107936212    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 3 2 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016724390.2 [sequence] [blastp]
XP_016724391.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_016724390.2)
cyto 4,  nucl 3,  mito 1,  nucl_plas 1  (predict for XP_016724391.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016724390.2)
other 8  (predict for XP_016724391.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107936212
ghi-r.1
for
107939262
ghi-r.1
for
107936210
ath-u.5
for
SKIP5
bra-r.6
for
103841358
bna-r.1
for
106445467
bna-r.1
for
106431354
bna-r.1
for
106416327
cit-r.1
for
127902735
cit-r.1
for
102625599
gma-u.5
for
100808414
vvi-u.5
for
100256604
ppo-u.5
for
112328195
mtr-u.5
for
11421143
sly-u.5
for
543829
sot-r.1
for
102590429
nta-r.1
for
107815974
nta-r.1
for
107762935
osa-u.5
for
4344171
zma-u.5
for
103633528
tae-r.2
for
123043861
tae-r.2
for
123051735
tae-r.2
for
123187642
hvu-r.1
for
123424896
sbi-r.1
for
8072254
bdi-r.1
for
100825770


Ortholog ID: 8983
Species ghi ghi ghi ath bra bna bna bna cit cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107936212 LOC107939262 LOC107936210 SKIP5 LOC103841358 LOC106445467 LOC106431354 LOC106415988 LOC127902735 LOC102625599 LOC100808414 LOC100256604 LOC112328195 LOC11421143 LOC543829 LOC102590429 LOC107815974 LOC107762935 LOC4344171 LOC103633528 LOC123043861 LOC123051735 LOC123187642 LOC123424896 LOC8072254 LOC100825770
Function* F-box protein SKIP5 F-box protein SKIP5 F-box protein SKIP5 SKP1/ASK-interacting protein 5 F-box protein SKIP5 F-box protein SKIP5 F-box protein SKIP5-like F-box protein SKIP5 F-box protein SKIP5-like F-box protein SKIP5 F-box protein SKIP5-like F-box protein SKIP5 F-box protein SKIP5 F-box protein SKIP5 SKIP5-like protein F-box protein SKIP5 F-box protein SKIP5 F-box protein SKIP5 F-box protein SKIP5 F-box protein SKIP5 F-box protein SKIP5 F-box protein SKIP5 F-box protein SKIP5 F-box protein SKIP5 F-box protein SKIP5 F-box protein SKIP5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03040 Spliceosome 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03083 Polycomb repressive complex 3
zma04712 Circadian rhythm - plant 3
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 3
sbi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107936212 107939262 107936210 824613 103841358 106445467 106431354 106415988 127902735 102625599 100808414 100256604 112328195 11421143 543829 102590429 107815974 107762935 4344171 103633528 123043861 123051735 123187642 123424896 8072254 100825770
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