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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107936227   RING-H2 finger protein ATL16 
 ghi-r.1   121220974   RING-H2 finger protein ATL16 
 ghi-r.1   121221036   RING-H2 finger protein ATL16 
 ath-u.5   AT5G43420   RING/U-box superfamily protein 
 ath-u.5   AT1G04360   RING/U-box superfamily protein 
 bra-r.6   103827972   RING-H2 finger protein ATL16 
 bna-r.1   125589883   RING-H2 finger protein ATL16-like 
 cit-r.1   102619218   RING-H2 finger protein ATL16 
 cit-r.1   102612313   RING-H2 finger protein ATL16 
 gma-u.5   100794749   RING-H2 finger protein ATL16 
 gma-u.5   100809883   RING-H2 finger protein ATL16 
 vvi-u.5   100249451   RING-H2 finger protein ATL16 
 ppo-u.5   7456544   RING-H2 finger protein ATL16 
 ppo-u.5   7471976   RING-H2 finger protein ATL16 
 mtr-u.5   25484424   RING-H2 finger protein ATL16 
 sly-u.5   101248916   RING-H2 finger protein ATL16 
 sly-u.5   101249928   RING-H2 finger protein ATL16-like 
 sot-r.1   102593598   RING-H2 finger protein ATL16 
 sot-r.1   102594011   RING-H2 finger protein ATL16 
 nta-r.1   107785127   RING-H2 finger protein ATL16-like 
 osa-u.5   9268438   RING-H2 finger protein ATL16 
 osa-u.5   4331167   RING-H2 finger protein ATL1 
 zma-u.5   113687189   uncharacterized LOC113687189 
 zma-u.5   100382345   putative RING zinc finger domain superfamily protein 
 zma-u.5   100273252   putative RING zinc finger domain superfamily protein 
 bdi-r.1   100836221   RING-H2 finger protein ATL16 

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Top 50 coexpressed genes to 107936227 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107936227 (ghi-r.1 coexpression data)

CoexMap"107936227"


ghiLOC107936227 | Entrez gene ID : 107936227    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma bdi hvu sbi tae cre
Paralog 3 2 1 1 2 2 1 2 1 2 2 1 2 3 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO MF
GO:0016740 [list] [network] transferase activity  (8317 genes)  IEA  
Protein XP_016724408.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  extr 1,  plas 1,  E.R. 1,  E.R._plas 1  (predict for XP_016724408.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016724408.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107936227
ghi-r.1
for
121220974
ghi-r.1
for
121221036
ath-u.5
for
AT5G43420
ath-u.5
for
AT1G04360
bra-r.6
for
103827972
bna-r.1
for
125589883
cit-r.1
for
102619218
cit-r.1
for
102612313
gma-u.5
for
100794749
gma-u.5
for
100809883
vvi-u.5
for
100249451
ppo-u.5
for
7456544
ppo-u.5
for
7471976
mtr-u.5
for
25484424
sly-u.5
for
101248916
sly-u.5
for
101249928
sot-r.1
for
102593598
sot-r.1
for
102594011
nta-r.1
for
107785127
osa-u.5
for
9268438
osa-u.5
for
4331167
zma-u.5
for
113687189
zma-u.5
for
100382345
zma-u.5
for
100273252
bdi-r.1
for
100836221


Ortholog ID: 1816
Species ghi ath ath bra bna cit cit gma vvi ppo ppo mtr mtr sly sly sot sot nta osa osa zma zma zma tae bdi
Symbol LOC121227840 AT5G43420 AT1G04360 LOC103827972 LOC125589883 LOC102619218 LOC102612313 LOC100775286 LOC100249451 LOC7456544 LOC7471976 LOC25484424 LOC25499242 LOC101248916 LOC101249928 LOC102593598 LOC102594011 LOC107785127 LOC9268438 LOC4331167 LOC113687189 LOC100382345 LOC100273252 LOC123149980 LOC100836221
Function* RING-H2 finger protein ATL16 RING/U-box superfamily protein RING/U-box superfamily protein RING-H2 finger protein ATL16 RING-H2 finger protein ATL16-like RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16-like RING-H2 finger protein ATL16 RING-H2 finger protein ATL16 RING-H2 finger protein ATL16-like RING-H2 finger protein ATL16 RING-H2 finger protein ATL1 uncharacterized LOC113687189 putative RING zinc finger domain superfamily protein putative RING zinc finger domain superfamily protein RING-H2 finger protein ATL16 RING-H2 finger protein ATL16
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00073 Cutin, suberine and wax biosynthesis 2
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 3
sot00040 Pentose and glucuronate interconversions 2
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sot00941 Flavonoid biosynthesis 2
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 8
nta00260 Glycine, serine and threonine metabolism 4
nta00460 Cyanoamino acid metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00073 Cutin, suberine and wax biosynthesis 4
zma00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00062 Fatty acid elongation 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121227840 834362 839540 103827972 125589883 102619218 102612313 100775286 100249451 7456544 7471976 25484424 25499242 101248916 101249928 102593598 102594011 107785127 9268438 4331167 113687189 100382345 100273252 123149980 100836221
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