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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107936308   ubiquitin-conjugating enzyme E2 2 
 ghi-r.1   107920403   ubiquitin-conjugating enzyme E2 2 
 ghi-r.1   107940011   ubiquitin-conjugating enzyme E2 2 
 ghi-r.1   107940421   ubiquitin-conjugating enzyme E2 2 
 ath-u.5   UBC2   ubiquiting-conjugating enzyme 2 
 ath-u.5   UBC3   ubiquitin-conjugating enzyme 3 
 ath-u.5   UBC1   ubiquitin carrier protein 1 
 bra-r.6   103839436   ubiquitin-conjugating enzyme E2 2 
 bra-r.6   103855016   ubiquitin-conjugating enzyme E2 3 
 bra-r.6   103831521   ubiquitin-conjugating enzyme E2 2 
 bna-r.1   106438196   ubiquitin-conjugating enzyme E2 2 
 bna-r.1   106432529   ubiquitin-conjugating enzyme E2 2-like 
 bna-r.1   125575310   ubiquitin-conjugating enzyme E2 2 
 cit-r.1   102607558   ubiquitin-conjugating enzyme E2 2 
 cit-r.1   102610592   ubiquitin-conjugating enzyme E2 2-like 
 cit-r.1   102610902   ubiquitin-conjugating enzyme E2 2-like 
 gma-u.5   100499775   uncharacterized LOC100499775 
 gma-u.5   100802605   ubiquitin-conjugating enzyme E2 2 
 gma-u.5   100784962   ubiquitin-conjugating enzyme E2 2 
 vvi-u.5   100242801   ubiquitin-conjugating enzyme E2 2 
 vvi-u.5   UBC2   ubiquitin-conjugating enzyme E2 A 
 vvi-u.5   100246805   ubiquitin-conjugating enzyme E2 2 
 ppo-u.5   18105807   ubiquitin-conjugating enzyme E2 2 
 ppo-u.5   7489696   ubiquitin-conjugating enzyme E2 2 
 ppo-u.5   7469898   ubiquitin-conjugating enzyme E2 2 
 mtr-u.5   25502755   ubiquitin-conjugating enzyme E2 2 
 sly-u.5   101265795   ubiquitin-conjugating enzyme E2 2 
 sly-u.5   101247803   ubiquitin-conjugating enzyme E2 2 
 sly-u.5   UBC1   E2 ubiquitin-conjugating enzyme 
 sot-r.1   102592500   ubiquitin-conjugating enzyme E2 2-like 
 sot-r.1   102577553   ubiquitin-conjugating enzyme-like protein 
 sot-r.1   102577800   ubiquitin carrier-like protein 
 nta-r.1   107775817   ubiquitin-conjugating enzyme E2 2-like 
 nta-r.1   107772211   ubiquitin-conjugating enzyme E2 2 
 nta-r.1   107822990   ubiquitin-conjugating enzyme E2 2 
 osa-u.5   4342488   ubiquitin-conjugating enzyme E2 2 
 osa-u.5   4337993   ubiquitin-conjugating enzyme E2 2 
 osa-u.5   4334386   ubiquitin-conjugating enzyme E2 2 
 zma-u.5   100284762   uncharacterized LOC100284762 
 zma-u.5   100283749   uncharacterized LOC100283749 
 zma-u.5   100280476   ubiquitin-conjugating enzyme E2-17 kDa 
 tae-r.2   123060413   ubiquitin-conjugating enzyme E2 2 
 tae-r.2   123052806   ubiquitin-conjugating enzyme E2 2 
 tae-r.2   123045030   ubiquitin-conjugating enzyme E2 2 
 hvu-r.1   123426150   ubiquitin-conjugating enzyme E2 2 
 hvu-r.1   123427116   ubiquitin-conjugating enzyme E2 2 
 hvu-r.1   123442938   ubiquitin-conjugating enzyme E2 2-like 
 sbi-r.1   8084377   ubiquitin-conjugating enzyme E2 2 
 sbi-r.1   8060700   ubiquitin-conjugating enzyme E2 2 
 sbi-r.1   110436323   ubiquitin-conjugating enzyme E2 2 
 bdi-r.1   100837256   ubiquitin-conjugating enzyme E2 2 
 bdi-r.1   100826690   ubiquitin-conjugating enzyme E2 2 
 bdi-r.1   100842938   ubiquitin-conjugating enzyme E2 2 
 cre-r.1   CHLRE_06g294850v5   uncharacterized protein 

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Top 50 coexpressed genes to 107936308 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107936308 (ghi-r.1 coexpression data)

CoexMap"107936308"


ghiLOC107936308 | Entrez gene ID : 107936308    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 3 3 1 3 3 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04120 [list] [network] Ubiquitin mediated proteolysis (368 genes)
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (192 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (406 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (557 genes)  IEA  
GO CC
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (56 genes)  IEA  
Protein XP_016724492.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 3,  cyto 1,  chlo 1,  extr 1,  mito 1,  golg_plas 1  (predict for XP_016724492.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_016724492.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107936308
ghi-r.1
for
107920403
ghi-r.1
for
107940011
ghi-r.1
for
107940421
ath-u.5
for
UBC2
ath-u.5
for
UBC3
ath-u.5
for
UBC1
bra-r.6
for
103839436
bra-r.6
for
103855016
bra-r.6
for
103831521
bna-r.1
for
106438196
bna-r.1
for
106432529
bna-r.1
for
125575310
cit-r.1
for
102607558
cit-r.1
for
102610592
cit-r.1
for
102610902
gma-u.5
for
100499775
gma-u.5
for
100802605
gma-u.5
for
100784962
vvi-u.5
for
100242801
vvi-u.5
for
UBC2
vvi-u.5
for
100246805
ppo-u.5
for
18105807
ppo-u.5
for
7489696
ppo-u.5
for
7469898
mtr-u.5
for
25502755
sly-u.5
for
101265795
sly-u.5
for
101247803
sly-u.5
for
UBC1
sot-r.1
for
102592500
sot-r.1
for
102577553
sot-r.1
for
102577800
nta-r.1
for
107775817
nta-r.1
for
107772211
nta-r.1
for
107822990
osa-u.5
for
4342488
osa-u.5
for
4337993
osa-u.5
for
4334386
zma-u.5
for
100284762
zma-u.5
for
100283749
zma-u.5
for
100280476
tae-r.2
for
123060413
tae-r.2
for
123052806
tae-r.2
for
123045030
hvu-r.1
for
123426150
hvu-r.1
for
123427116
hvu-r.1
for
123442938
sbi-r.1
for
8084377
sbi-r.1
for
8060700
sbi-r.1
for
110436323
bdi-r.1
for
100837256
bdi-r.1
for
100826690
bdi-r.1
for
100842938
cre-r.1
for
CHLRE_06g294850v5


Ortholog ID: 821
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC107936308 LOC107920403 LOC107946502 UBC2 UBC3 UBC1 LOC103853981 LOC103842970 LOC103827507 LOC106432529 LOC125574919 LOC106396436 LOC102607558 LOC102610592 LOC102628134 LOC100802605 LOC100306222 LOC100803594 LOC100242801 UBC2 LOC100246805 LOC18105807 LOC7489696 LOC7469898 LOC25502755 LOC101265795 LOC101247803 UBC41 LOC102577800 LOC102583372 LOC102593648 LOC107775817 LOC107772211 LOC107812668 LOC4342488 LOC4337993 LOC4334386 LOC100284762 LOC100283749 LOC100192052 LOC123052806 LOC123068943 LOC123105348 LOC123426150 LOC123427116 LOC123452622 LOC8084377 LOC8060700 LOC110436323 LOC100837256 LOC100826690 LOC100845428 CHLRE_06g294850v5
Function* ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquiting-conjugating enzyme 2 ubiquitin-conjugating enzyme 3 ubiquitin carrier protein 1 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 1 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2-like ubiquitin-conjugating enzyme E2 3 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2-like ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 A ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 E2 ubiquitin-conjugating enzyme UBC41 ubiquitin carrier-like protein ubiquitin-conjugating enzyme E2 2-like ubiquitin-conjugating enzyme E2 2-like ubiquitin-conjugating enzyme E2 2-like ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 uncharacterized LOC100284762 uncharacterized LOC100283749 Ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2-like ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 ubiquitin-conjugating enzyme E2 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 3
ghi04130 SNARE interactions in vesicular transport 3
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04144 Endocytosis 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 5
ath04141 Protein processing in endoplasmic reticulum 3
ath04016 MAPK signaling pathway - plant 2
ath04075 Plant hormone signal transduction 2
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 4
ath04144 Endocytosis 3
ath04141 Protein processing in endoplasmic reticulum 3
ath04145 Phagosome 2
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna03010 Ribosome 2
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 3
cit04075 Plant hormone signal transduction 3
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 8
cit03083 Polycomb repressive complex 6
cit04141 Protein processing in endoplasmic reticulum 6
cit00710 Carbon fixation by Calvin cycle 3
cit01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 7
gma04141 Protein processing in endoplasmic reticulum 3
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 6
gma04130 SNARE interactions in vesicular transport 3
gma03083 Polycomb repressive complex 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04130 SNARE interactions in vesicular transport 3
vvi04144 Endocytosis 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 4
vvi04141 Protein processing in endoplasmic reticulum 4
vvi03083 Polycomb repressive complex 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi03083 Polycomb repressive complex 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 4
ppo04120 Ubiquitin mediated proteolysis 3
ppo04136 Autophagy - other 2
ppo03083 Polycomb repressive complex 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 5
ppo04141 Protein processing in endoplasmic reticulum 4
ppo03083 Polycomb repressive complex 3
ppo03015 mRNA surveillance pathway 2
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo04120 Ubiquitin mediated proteolysis 3
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 5
sly03050 Proteasome 4
sly03013 Nucleocytoplasmic transport 2
sly03083 Polycomb repressive complex 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot04144 Endocytosis 3
sot03018 RNA degradation 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
sot04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00230 Purine metabolism 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 9
nta03083 Polycomb repressive complex 6
nta04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 7
osa04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa04120 Ubiquitin mediated proteolysis 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma04142 Lysosome 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 9
zma04141 Protein processing in endoplasmic reticulum 4
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae00900 Terpenoid backbone biosynthesis 3
tae04144 Endocytosis 3
tae04814 Motor proteins 3
tae04820 Cytoskeleton in muscle cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 7
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 9
tae03013 Nucleocytoplasmic transport 6
tae03008 Ribosome biogenesis in eukaryotes 3
tae03250 Viral life cycle - HIV-1 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu04141 Protein processing in endoplasmic reticulum 2
hvu00240 Pyrimidine metabolism 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00600 Sphingolipid metabolism 2
sbi04142 Lysosome 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
sbi04144 Endocytosis 3
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 4
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00620 Pyruvate metabolism 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
cre00190 Oxidative phosphorylation 2
cre04142 Lysosome 2
cre04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107936308 107920403 107946502 814805 836374 838002 103853981 103842970 103827507 106432529 125574919 106396436 102607558 102610592 102628134 100802605 100306222 100803594 100242801 100265550 100246805 18105807 7489696 7469898 25502755 101265795 101247803 101258213 102577800 102583372 102593648 107775817 107772211 107812668 4342488 4337993 4334386 100284762 100283749 100192052 123052806 123068943 123105348 123426150 123427116 123452622 8084377 8060700 110436323 100837256 100826690 100845428 5727129
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