ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107938337	protein DETOXIFICATION 43
ghi-r.1	107918626	protein DETOXIFICATION 43
ghi-r.1	107906529	protein DETOXIFICATION 43
ghi-r.1	107902299	protein DETOXIFICATION 44, chloroplastic
ath-u.5	AT2G38330	MATE efflux family protein
ath-u.5	FRD3	MATE efflux family protein
ath-u.5	AT4G38380	MATE efflux family protein
bra-r.6	103832853	protein DETOXIFICATION 42
bna-r.1	111198031	protein DETOXIFICATION 42-like
bna-r.1	125574806	protein DETOXIFICATION 42-like
bna-r.1	125580421	protein DETOXIFICATION 43-like
cit-r.1	102621711	protein DETOXIFICATION 45, chloroplastic
cit-r.1	102624252	protein DETOXIFICATION 45, chloroplastic-like
gma-u.5	MATE13	citrate-proton symporter
gma-u.5	100805918	protein DETOXIFICATION 44, chloroplastic
vvi-u.5	100241685	protein DETOXIFICATION 42
ppo-u.5	7488720	protein DETOXIFICATION 44, chloroplastic
ppo-u.5	7482281	protein DETOXIFICATION 43
ppo-u.5	7474953	protein DETOXIFICATION 45, chloroplastic
mtr-u.5	11444674	protein DETOXIFICATION 43
mtr-u.5	25501046	protein DETOXIFICATION 43
mtr-u.5	11438253	protein DETOXIFICATION 43
sly-u.5	101245696	protein DETOXIFICATION 43
sly-u.5	101248929	protein DETOXIFICATION 44, chloroplastic
sot-r.1	102603217	protein DETOXIFICATION 44, chloroplastic
sot-r.1	102604703	protein DETOXIFICATION 45, chloroplastic
sot-r.1	102598780	protein DETOXIFICATION 42
nta-r.1	107761146	protein DETOXIFICATION 43-like
nta-r.1	107762577	protein DETOXIFICATION 44, chloroplastic
nta-r.1	107771007	protein DETOXIFICATION 45, chloroplastic-like
osa-u.5	4332069	protein DETOXIFICATION 42
osa-u.5	4347774	protein DETOXIFICATION 45, chloroplastic
osa-u.5	4348274	protein DETOXIFICATION 42
zma-u.5	103630881	uncharacterized LOC103630881
zma-u.5	100501783	uncharacterized LOC100501783
zma-u.5	100383875	multidrug and toxic compound extrusion3
tae-r.2	123103203	protein DETOXIFICATION 44, chloroplastic
tae-r.2	123060391	protein DETOXIFICATION 42
tae-r.2	123085162	protein DETOXIFICATION 42
hvu-r.1	123448136	protein DETOXIFICATION 44, chloroplastic-like
hvu-r.1	123449299	protein DETOXIFICATION 42-like
hvu-r.1	123444390	protein DETOXIFICATION 42-like
sbi-r.1	8085298	protein DETOXIFICATION 42
sbi-r.1	110433897	protein DETOXIFICATION 45, chloroplastic-like
bdi-r.1	100836155	protein DETOXIFICATION 45, chloroplastic
bdi-r.1	100840460	uncharacterized LOC100840460
bdi-r.1	100831075	protein DETOXIFICATION 42
cre-r.1	CHLRE_08g369600v5	uncharacterized protein
cre-r.1	CHLRE_17g739650v5	uncharacterized protein

Top 50 coexpressed genes to 107938337 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107938337 (ghi-r.1 coexpression data)

CoexMap"107938337"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0055085 [list] [network] transmembrane transport

(2365 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(8195 genes)

IEA

GO MF

GO:0015137 [list] [network] citrate transmembrane transporter activity	(4 genes)	IEA
GO:0042910 [list] [network] xenobiotic transmembrane transporter activity	(132 genes)	IEA
GO:0015297 [list] [network] antiporter activity	(442 genes)	IEA

Protein

XP_016726939.1 [sequence] [blastp]
XP_016726940.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 9	(predict for XP_016726939.1)
vacu 9	(predict for XP_016726940.1)

Subcellular
localization
TargetP

other 9	(predict for XP_016726939.1)
other 9	(predict for XP_016726940.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107938337	ghi-r.1 for 107918626	ghi-r.1 for 107906529	ghi-r.1 for 107902299	ath-u.5 for AT2G38330	ath-u.5 for FRD3	ath-u.5 for AT4G38380	bra-r.6 for 103832853	bna-r.1 for 111198031	bna-r.1 for 125574806	bna-r.1 for 125580421	cit-r.1 for 102621711	cit-r.1 for 102624252	gma-u.5 for MATE13	gma-u.5 for 100805918	vvi-u.5 for 100241685	ppo-u.5 for 7488720	ppo-u.5 for 7482281	ppo-u.5 for 7474953	mtr-u.5 for 11444674	mtr-u.5 for 25501046	mtr-u.5 for 11438253	sly-u.5 for 101245696	sly-u.5 for 101248929	sot-r.1 for 102603217	sot-r.1 for 102604703	sot-r.1 for 102598780	nta-r.1 for 107761146	nta-r.1 for 107762577	nta-r.1 for 107771007	osa-u.5 for 4332069	osa-u.5 for 4347774	osa-u.5 for 4348274	zma-u.5 for 103630881	zma-u.5 for 100501783	zma-u.5 for 100383875	tae-r.2 for 123103203	tae-r.2 for 123060391	tae-r.2 for 123085162	hvu-r.1 for 123448136	hvu-r.1 for 123449299	hvu-r.1 for 123444390	sbi-r.1 for 8085298	sbi-r.1 for 110433897	bdi-r.1 for 100836155	bdi-r.1 for 100840460	bdi-r.1 for 100831075	cre-r.1 for CHLRE_08g369600v5	cre-r.1 for CHLRE_17g739650v5

Ortholog

Ortholog ID: 361

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

FRD3

Function^*

protein DETOXIFICATION 43

protein DETOXIFICATION 44, chloroplastic

MATE efflux family protein

protein DETOXIFICATION 42

protein DETOXIFICATION 43

protein DETOXIFICATION 44, chloroplastic

protein DETOXIFICATION 42

protein DETOXIFICATION 44, chloroplastic