ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107938378	uncharacterized LOC107938378
ghi-r.1	107945147	uncharacterized LOC107945147
ghi-r.1	107943028	uncharacterized LOC107943028
ghi-r.1	107930610	uncharacterized LOC107930610
ath-u.5	AT3G19540	glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620)
ath-u.5	AT1G49840	glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620)
bra-r.6	103832914	uncharacterized LOC103832914
bra-r.6	103837206	uncharacterized LOC103837206
bra-r.6	103869445	uncharacterized LOC103869445
bna-r.1	125608874	uncharacterized LOC125608874
bna-r.1	106435645	uncharacterized LOC106435645
bna-r.1	106346589	uncharacterized LOC106346589
cit-r.1	102615116	uncharacterized LOC102615116
cit-r.1	102618172	uncharacterized LOC102618172
gma-u.5	100792748	uncharacterized LOC100792748
gma-u.5	100813272	uncharacterized LOC100813272
gma-u.5	100813032	uncharacterized LOC100813032
vvi-u.5	100252320	uncharacterized LOC100252320
vvi-u.5	100257657	uncharacterized LOC100257657
ppo-u.5	7465058	uncharacterized LOC7465058
ppo-u.5	7469614	uncharacterized LOC7469614
ppo-u.5	18104811	uncharacterized LOC18104811
mtr-u.5	25489930	uncharacterized LOC25489930
mtr-u.5	25485360	uncharacterized LOC25485360
mtr-u.5	11420386	uncharacterized LOC11420386
sly-u.5	101265729	uncharacterized LOC101265729
sly-u.5	101246097	uncharacterized LOC101246097
sot-r.1	102578171	uncharacterized LOC102578171
sot-r.1	102594434	uncharacterized LOC102594434
nta-r.1	107780803	uncharacterized LOC107780803
nta-r.1	107825501	uncharacterized LOC107825501
nta-r.1	107814595	uncharacterized LOC107814595
osa-u.5	4333415	uncharacterized LOC4333415
osa-u.5	4343777	uncharacterized LOC4343777
osa-u.5	4352639	uncharacterized LOC4352639
zma-u.5	103626058	uncharacterized LOC103626058
zma-u.5	100383524	uncharacterized LOC100383524
zma-u.5	103640485	uncharacterized LOC103640485
tae-r.2	123044354	uncharacterized LOC123044354
tae-r.2	123096126	uncharacterized LOC123096126
tae-r.2	123052226	uncharacterized LOC123052226
hvu-r.1	123447781	uncharacterized LOC123447781
hvu-r.1	123425477	uncharacterized LOC123425477
hvu-r.1	123395714	uncharacterized LOC123395714
sbi-r.1	8063225	uncharacterized LOC8063225
sbi-r.1	8078986	uncharacterized LOC8078986
sbi-r.1	8069690	uncharacterized LOC8069690
bdi-r.1	100828848	uncharacterized LOC100828848
bdi-r.1	100828062	uncharacterized LOC100828062
bdi-r.1	100833659	uncharacterized LOC100833659

Top 50 coexpressed genes to 107938378 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107938378 (ghi-r.1 coexpression data)

CoexMap"107938378"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016726995.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 1

(predict for XP_016726995.2)

Subcellular
localization
TargetP

chlo 9

(predict for XP_016726995.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107938378	ghi-r.1 for 107945147	ghi-r.1 for 107943028	ghi-r.1 for 107930610	ath-u.5 for AT3G19540	ath-u.5 for AT1G49840	bra-r.6 for 103832914	bra-r.6 for 103837206	bra-r.6 for 103869445	bna-r.1 for 125608874	bna-r.1 for 106435645	bna-r.1 for 106346589	cit-r.1 for 102615116	cit-r.1 for 102618172	gma-u.5 for 100792748	gma-u.5 for 100813272	gma-u.5 for 100813032	vvi-u.5 for 100252320	vvi-u.5 for 100257657	ppo-u.5 for 7465058	ppo-u.5 for 7469614	ppo-u.5 for 18104811	mtr-u.5 for 25489930	mtr-u.5 for 25485360	mtr-u.5 for 11420386	sly-u.5 for 101265729	sly-u.5 for 101246097	sot-r.1 for 102578171	sot-r.1 for 102594434	nta-r.1 for 107780803	nta-r.1 for 107825501	nta-r.1 for 107814595	osa-u.5 for 4333415	osa-u.5 for 4343777	osa-u.5 for 4352639	zma-u.5 for 103626058	zma-u.5 for 100383524	zma-u.5 for 103640485	tae-r.2 for 123044354	tae-r.2 for 123096126	tae-r.2 for 123052226	hvu-r.1 for 123447781	hvu-r.1 for 123425477	hvu-r.1 for 123395714	sbi-r.1 for 8063225	sbi-r.1 for 8078986	sbi-r.1 for 8069690	bdi-r.1 for 100828848	bdi-r.1 for 100828062	bdi-r.1 for 100833659

Ortholog

Ortholog ID: 1978

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107938378

uncharacterized LOC107943028

uncharacterized LOC107894310

glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620)

uncharacterized LOC103832914

uncharacterized LOC103837206

uncharacterized LOC103869445

uncharacterized LOC106435645

uncharacterized LOC106346589

uncharacterized LOC106397236

uncharacterized LOC102615116

uncharacterized LOC102618172

uncharacterized LOC100792748

uncharacterized LOC100813272

uncharacterized LOC100800721

uncharacterized LOC100252320

uncharacterized LOC100257657

uncharacterized LOC7465058

uncharacterized LOC7469614

uncharacterized LOC18104811

uncharacterized LOC25489930

uncharacterized LOC25485360

uncharacterized LOC11420386

uncharacterized LOC101265729

uncharacterized LOC101246097

uncharacterized LOC102578171

uncharacterized LOC102594434

uncharacterized LOC107825501

uncharacterized LOC107814595

uncharacterized LOC107805791

uncharacterized LOC4333415

uncharacterized LOC4343777

uncharacterized LOC4352639

uncharacterized LOC103626058

uncharacterized LOC100383524

uncharacterized LOC100277866

uncharacterized LOC123044354

uncharacterized LOC123086850

uncharacterized LOC123119625

uncharacterized LOC123447781

uncharacterized LOC123425477

uncharacterized LOC123395714

uncharacterized LOC8078986

uncharacterized LOC8069690

uncharacterized LOC8062523

uncharacterized LOC100828848

uncharacterized LOC100828062

uncharacterized LOC100833659

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	4
gma01200	Carbon metabolism	3
gma01230	Biosynthesis of amino acids	3
gma00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00670	One carbon pool by folate	5
sot01200	Carbon metabolism	4
sot00040	Pentose and glucuronate interconversions	3
sot01230	Biosynthesis of amino acids	3
sot00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4
nta04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00380	Tryptophan metabolism	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	5
tae04070	Phosphatidylinositol signaling system	2
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00460	Cyanoamino acid metabolism	2
hvu00500	Starch and sucrose metabolism	2
hvu00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00010	Glycolysis / Gluconeogenesis	2
sbi00710	Carbon fixation by Calvin cycle	2
sbi01200	Carbon metabolism	2
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	5
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03030	DNA replication	3
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	2

Expression

Expression pattern

Entrez Gene ID^*

107938378

107943028

107894310

821490

841407

103832914

103837206

103869445

106435645

106346589

106397236

102615116

102618172

100792748

100813272

100800721

100252320

100257657

7465058

7469614

18104811

25489930

25485360

11420386

101265729

101246097

102578171

102594434

107825501

107814595

107805791

4333415

4343777

4352639

103626058

100383524

100277866

123044354

123086850

123119625

123447781

123425477

123395714

8078986

8069690

8062523

100828848

100828062

100833659

The preparation time of this page was 0.1 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	3	2	3	2	3	3	2	2	3	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107938378 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107938378 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**