ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107938504	eukaryotic translation initiation factor 3 subunit B
ghi-r.1	107945214	eukaryotic translation initiation factor 3 subunit B
ghi-r.1	107928605	eukaryotic translation initiation factor 3 subunit B
ath-u.5	EIF3B-2	eukaryotic translation initiation factor 3B-2
ath-u.5	TIF3B1	translation initiation factor 3B1
bra-r.6	103864588	eukaryotic translation initiation factor 3 subunit B
bra-r.6	103842228	eukaryotic translation initiation factor 3 subunit B
bna-r.1	111215058	eukaryotic translation initiation factor 3 subunit B
bna-r.1	106391076	eukaryotic translation initiation factor 3 subunit B
bna-r.1	106368593	eukaryotic translation initiation factor 3 subunit B
cit-r.1	102614274	eukaryotic translation initiation factor 3 subunit B
gma-u.5	100817394	eukaryotic translation initiation factor 3 subunit B
gma-u.5	100779711	eukaryotic translation initiation factor 3 subunit B
vvi-u.5	100244090	eukaryotic translation initiation factor 3 subunit B
ppo-u.5	18107516	eukaryotic translation initiation factor 3 subunit B
ppo-u.5	7459900	eukaryotic translation initiation factor 3 subunit B
mtr-u.5	11429932	eukaryotic translation initiation factor 3 subunit B
sly-u.5	101267059	eukaryotic translation initiation factor 3 subunit B
sot-r.1	102606334	eukaryotic translation initiation factor 3 subunit B
nta-r.1	107817529	eukaryotic translation initiation factor 3 subunit B-like
nta-r.1	107806139	eukaryotic translation initiation factor 3 subunit B-like
nta-r.1	142161872	eukaryotic translation initiation factor 3 subunit B-like
osa-u.5	4349446	eukaryotic translation initiation factor 3 subunit B
zma-u.5	100216593	Eukaryotic translation initiation factor 3 subunit B
tae-r.2	123113697	eukaryotic translation initiation factor 3 subunit B
tae-r.2	123105427	eukaryotic translation initiation factor 3 subunit B
tae-r.2	123096166	eukaryotic translation initiation factor 3 subunit B
hvu-r.1	123452734	eukaryotic translation initiation factor 3 subunit B-like
hvu-r.1	123447805	eukaryotic translation initiation factor 3 subunit B-like
sbi-r.1	8055159	eukaryotic translation initiation factor 3 subunit B
bdi-r.1	100834858	eukaryotic translation initiation factor 3 subunit B
cre-r.1	CHLRE_03g190100v5	uncharacterized protein

Top 50 coexpressed genes to 107938504 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107938504 (ghi-r.1 coexpression data)

CoexMap"107938504"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006413 [list] [network] translational initiation

(151 genes)

IEA

GO CC

GO:0005852 [list] [network] eukaryotic translation initiation factor 3 complex

(72 genes)

IEA

GO MF

GO:0031369 [list] [network] translation initiation factor binding	(33 genes)	IEA
GO:0003743 [list] [network] translation initiation factor activity	(198 genes)	IEA
GO:0003723 [list] [network] RNA binding	(3053 genes)	IEA

Protein

XP_016727165.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, chlo 2, nucl 2, cysk 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_016727165.2)

Subcellular
localization
TargetP

other 7

(predict for XP_016727165.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107938504	ghi-r.1 for 107945214	ghi-r.1 for 107928605	ath-u.5 for EIF3B-2	ath-u.5 for TIF3B1	bra-r.6 for 103864588	bra-r.6 for 103842228	bna-r.1 for 111215058	bna-r.1 for 106391076	bna-r.1 for 106368593	cit-r.1 for 102614274	gma-u.5 for 100817394	gma-u.5 for 100779711	vvi-u.5 for 100244090	ppo-u.5 for 18107516	ppo-u.5 for 7459900	mtr-u.5 for 11429932	sly-u.5 for 101267059	sot-r.1 for 102606334	nta-r.1 for 107817529	nta-r.1 for 107806139	nta-r.1 for 142161872	osa-u.5 for 4349446	zma-u.5 for 100216593	tae-r.2 for 123113697	tae-r.2 for 123105427	tae-r.2 for 123096166	hvu-r.1 for 123452734	hvu-r.1 for 123447805	sbi-r.1 for 8055159	bdi-r.1 for 100834858	cre-r.1 for CHLRE_03g190100v5

Ortholog

Ortholog ID: 5845

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC107938504

LOC107928605

EIF3B-2

TIF3B1

Function^*