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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107919205  F-box/LRR-repeat protein At3g59190 
 ghi-r.1  107903166  putative F-box/LRR-repeat protein At3g49150 
 ghi-r.1  107893518  putative FBD-associated F-box protein At3g50710 
 bra-r.6  103841774  F-box/LRR-repeat protein At4g14096-like 
 bra-r.6  103841759  F-box/LRR-repeat protein At3g58930 
 bna-r.1  106368355  F-box/LRR-repeat protein At3g59200 
 cit-r.1  102609638  F-box/FBD/LRR-repeat protein At5g22700-like 
 cit-r.1  102608823  F-box/LRR-repeat protein At4g14103 
 vvi-u.5  104877721  F-box/LRR-repeat protein At3g59190 
 mtr-u.5  25492927  F-box/LRR-repeat protein At4g14103 
 mtr-u.5  25492930  F-box/FBD/LRR-repeat protein At5g53840 
 sly-u.5  101255714  F-box/LRR-repeat protein At4g14103 
 sly-u.5  101252019  FBD-associated F-box protein At2g26860 
 sly-u.5  101247567  F-box/FBD/LRR-repeat protein At3g26920-like 
 sot-r.1  107060237  uncharacterized LOC107060237 
 sot-r.1  102578197  F-box protein At4g22280-like 
 nta-r.1  107812093  putative FBD-associated F-box protein At3g50710 
 nta-r.1  107774541  F-box protein At4g22280-like 

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Top 50 coexpressed genes to 107919205 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107919205 (ghi-r.1 coexpression data)

CoexMap"107938641"


ghiLOC107938641 | Entrez gene ID : 107938641
Species ghi bra bna cit vvi mtr sly sot nta gma zma cre ppo sbi ath tae osa hvu bdi
Paralog 3 2 1 2 1 2 3 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040942271.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 1,  E.R. 1,  cysk 1,  cysk_nucl 1  (predict for XP_040942271.1)
Subcellular
localization
TargetP
other 9  (predict for XP_040942271.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107919205


ghi-r.1
for
107903166


ghi-r.1
for
107893518


bra-r.6
for
103841774


bra-r.6
for
103841759


bna-r.1
for
106368355


cit-r.1
for
102609638


cit-r.1
for
102608823


vvi-u.5
for
104877721


mtr-u.5
for
25492927


mtr-u.5
for
25492930


sly-u.5
for
101255714


sly-u.5
for
101252019


sly-u.5
for
101247567


sot-r.1
for
107060237


sot-r.1
for
102578197


nta-r.1
for
107812093


nta-r.1
for
107774541



Ortholog ID: 145
Species ghi ath ath bra bna bna bna cit cit cit vvi mtr sly sly sly sot sot nta
Symbol LOC107893518 AT3G59210 AT3G59200 LOC103857415 LOC106387974 LOC106353160 LOC106353159 LOC102608914 LOC102618892 LOC102618124 LOC104877721 LOC11412043 LOC101255714 LOC101252019 LOC101247567 LOC107060237 LOC102587149 LOC107762245
Function* putative FBD-associated F-box protein At3g50710 F-box/RNI-like superfamily protein F-box/RNI-like superfamily protein F-box/LRR-repeat protein At3g58930-like F-box/LRR-repeat protein At3g58930-like F-box/LRR-repeat protein At3g59210-like F-box/LRR-repeat protein At3g59190 F-box/LRR-repeat protein At3g58900-like putative FBD-associated F-box protein At5g56440 F-box/FBD/LRR-repeat protein At5g53840-like F-box/LRR-repeat protein At3g59190 F-box/LRR-repeat protein At3g58900 F-box/LRR-repeat protein At4g14103 FBD-associated F-box protein At2g26860 F-box/FBD/LRR-repeat protein At3g26920-like uncharacterized LOC107060237 F-box/FBD/LRR-repeat protein At3g52680-like F-box protein At4g22280
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 4
bna03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 3
mtr03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107893518 825090 825089 103857415 106387974 106353160 106353159 102608914 102618892 102618124 104877721 11412043 101255714 101252019 101247567 107060237 102587149 107762245
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