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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107938701   protein FAR1-RELATED SEQUENCE 12 
 ath-u.5   AT2G43280   Far-red impaired responsive (FAR1) family protein 
 ath-u.5   AT3G07500   Far-red impaired responsive (FAR1) family protein 
 ath-u.5   AT3G59470   Far-red impaired responsive (FAR1) family protein 
 gma-u.5   100813124   protein FAR1-RELATED SEQUENCE 5 
 gma-u.5   100810283   protein FAR1-RELATED SEQUENCE 5 
 gma-u.5   100777092   FAR1 DNA-binding domain-containing protein 
 vvi-u.5   100265314   protein FAR1-RELATED SEQUENCE 5-like 
 ppo-u.5   112323250   protein FAR-RED ELONGATED HYPOCOTYL 3 
 ppo-u.5   7469585   protein FAR1-RELATED SEQUENCE 12 
 ppo-u.5   7462455   protein FAR1-RELATED SEQUENCE 5 
 mtr-u.5   112416292   protein FAR1-RELATED SEQUENCE 5 
 mtr-u.5   11430032   protein FAR1-RELATED SEQUENCE 6 
 mtr-u.5   25488459   protein FAR1-RELATED SEQUENCE 2 
 sly-u.5   101265766   protein FAR1-RELATED SEQUENCE 7 
 sly-u.5   101266066   protein FAR1-RELATED SEQUENCE 2 
 osa-u.5   4332292   uncharacterized LOC4332292 

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Top 50 coexpressed genes to 107938701 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107938701 (ghi-r.1 coexpression data)

CoexMap"107938701"


ghiLOC107938701 | Entrez gene ID : 107938701    
Species ghi ath gma vvi ppo mtr sly osa bdi hvu bra cit bna sbi sot nta cre tae zma
Paralog 1 3 3 1 3 3 2 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016727418.1 [sequence] [blastp]
XP_016727419.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  cysk 1,  cysk_plas 1  (predict for XP_016727418.1)
cysk 9  (predict for XP_016727419.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_016727418.1)
other 8  (predict for XP_016727419.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107938701
ath-u.5
for
AT2G43280
ath-u.5
for
AT3G07500
ath-u.5
for
AT3G59470
gma-u.5
for
100813124
gma-u.5
for
100810283
gma-u.5
for
100777092
vvi-u.5
for
100265314
ppo-u.5
for
112323250
ppo-u.5
for
7469585
ppo-u.5
for
7462455
mtr-u.5
for
112416292
mtr-u.5
for
11430032
mtr-u.5
for
25488459
sly-u.5
for
101265766
sly-u.5
for
101266066
osa-u.5
for
4332292


Ortholog ID: 810
Species ghi ghi ath ath bra bna bna cit cit gma gma vvi ppo mtr mtr sly sot nta nta osa tae tae hvu sbi bdi
Symbol LOC107926016 LOC107910164 AT4G12850 AT3G59470 LOC103830214 LOC106402848 LOC111208488 LOC102624315 LOC102618974 LOC100787741 LOC100810283 LOC100248330 LOC7469585 LOC112416292 LOC25488459 LOC101254499 LOC102600025 LOC107830790 LOC107830791 LOC4332292 LOC123085322 LOC123098017 LOC123449117 LOC8078835 LOC100841807
Function* protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 12 Far-red impaired responsive (FAR1) family protein Far-red impaired responsive (FAR1) family protein protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 6-like protein FAR1-RELATED SEQUENCE 6-like protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 1 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 12 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 2 protein FAR1-RELATED SEQUENCE 2-like protein FAR1-RELATED SEQUENCE 2-like uncharacterized LOC107830790 uncharacterized LOC107830791 uncharacterized LOC4332292 uncharacterized LOC123085322 uncharacterized LOC123098017 uncharacterized LOC123449117 uncharacterized LOC8078835 uncharacterized LOC100841807
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00220 Arginine biosynthesis 2
mtr00240 Pyrimidine metabolism 2
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00071 Fatty acid degradation 3
osa01212 Fatty acid metabolism 3
osa00280 Valine, leucine and isoleucine degradation 2
osa00592 alpha-Linolenic acid metabolism 2
osa04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107926016 107910164 826897 825116 103830214 106402848 111208488 102624315 102618974 100787741 100810283 100248330 7469585 112416292 25488459 101254499 102600025 107830790 107830791 4332292 123085322 123098017 123449117 8078835 100841807
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