ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107939226	uncharacterized LOC107939226
ghi-r.1	121214867	uncharacterized LOC121214867
ghi-r.1	107928886	uncharacterized LOC107928886
ghi-r.1	107908602	uncharacterized LOC107908602
ath-u.5	AT2G01080	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
bra-r.6	103832769	NDR1/HIN1-like protein 2
bra-r.6	103827610	NDR1/HIN1-like protein 10
bna-r.1	125594075	NDR1/HIN1-like protein 2
bna-r.1	125601282	NDR1/HIN1-like protein 10
bna-r.1	106381935	NDR1/HIN1-like protein 2
cit-r.1	102625126	uncharacterized LOC102625126
gma-u.5	100807434	uncharacterized LOC100807434
gma-u.5	100789962	uncharacterized LOC100789962
vvi-u.5	100267543	NDR1/HIN1-like protein 13
ppo-u.5	18094898	uncharacterized LOC18094898
ppo-u.5	18096629	uncharacterized LOC18096629
mtr-u.5	11434329	uncharacterized LOC11434329
sly-u.5	101244424	NDR1/HIN1-like protein 26
sot-r.1	102598395	uncharacterized LOC102598395
nta-r.1	107803517	NDR1/HIN1-like protein 13
nta-r.1	107792296	NDR1/HIN1-like protein 13
nta-r.1	107788246	uncharacterized LOC107788246
osa-u.5	4332329	uncharacterized LOC4332329
zma-u.5	100191968	harpin-induced protein
zma-u.5	100272557	harpin-induced protein
tae-r.2	123097985	uncharacterized LOC123097985
tae-r.2	123092681	uncharacterized LOC123092681
tae-r.2	123085359	uncharacterized LOC123085359
hvu-r.1	123449092	uncharacterized LOC123449092
sbi-r.1	8054297	uncharacterized LOC8054297
bdi-r.1	100824837	uncharacterized LOC100824837

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane

(2553 genes)

IEA

GO MF

Protein

XP_016728009.1 [sequence] [blastp]

Subcellular
localization
wolf

golg 3, E.R. 2, cyto 1, golg_plas 1, E.R._vacu 1

(predict for XP_016728009.1)

Subcellular
localization
TargetP

other 5, mito 3

(predict for XP_016728009.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107939226	ghi-r.1 for 121214867	ghi-r.1 for 107928886	ghi-r.1 for 107908602	ath-u.5 for AT2G01080	bra-r.6 for 103832769	bra-r.6 for 103827610	bna-r.1 for 125594075	bna-r.1 for 125601282	bna-r.1 for 106381935	cit-r.1 for 102625126	gma-u.5 for 100807434	gma-u.5 for 100789962	vvi-u.5 for 100267543	ppo-u.5 for 18094898	ppo-u.5 for 18096629	mtr-u.5 for 11434329	sly-u.5 for 101244424	sot-r.1 for 102598395	nta-r.1 for 107803517	nta-r.1 for 107792296	nta-r.1 for 107788246	osa-u.5 for 4332329	zma-u.5 for 100191968	zma-u.5 for 100272557	tae-r.2 for 123097985	tae-r.2 for 123092681	tae-r.2 for 123085359	hvu-r.1 for 123449092	sbi-r.1 for 8054297	bdi-r.1 for 100824837

Ortholog

Ortholog ID: 5938

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107939226

uncharacterized LOC121214867

uncharacterized LOC107928886

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

NDR1/HIN1-like protein 2

NDR1/HIN1-like protein 10

uncharacterized LOC102625126

uncharacterized LOC100807434

uncharacterized LOC100789962

NDR1/HIN1-like protein 13

uncharacterized LOC18094898

uncharacterized LOC18096629

uncharacterized LOC11434329

NDR1/HIN1-like protein 26

uncharacterized LOC102598395

NDR1/HIN1-like protein 13

uncharacterized LOC107768848

uncharacterized LOC4332329

harpin-induced protein

uncharacterized LOC123097985

uncharacterized LOC123092681

uncharacterized LOC123085359

uncharacterized LOC123449092

uncharacterized LOC8054297

uncharacterized LOC100824837

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2
ghi00230	Purine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2
ath00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01230	Biosynthesis of amino acids	3
cit00100	Steroid biosynthesis	2
cit00010	Glycolysis / Gluconeogenesis	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	6
hvu01200	Carbon metabolism	5
hvu00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
hvu00260	Glycine, serine and threonine metabolism	2
hvu00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04517	IgSF CAM signaling	2
bdi04814	Motor proteins	2

Expression

Expression pattern

Entrez Gene ID^*

107939226

121214867

107928886

814636

103832769

103827610

125601282

106400532

106410084

102625126

100807434

100789962

100267543

18094898

18096629

11434329

101244424

102598395

107803517

107792296

107768848

4332329

100191968

100272557

123097985

123092681

123085359

123449092

8054297

100824837

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107939226 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107939226 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	2	3	1	2	1	2	1	1	1	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107939226 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107939226 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**