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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107939645   scarecrow-like protein 21 
 ghi-r.1   107939640   chitin-inducible gibberellin-responsive protein 1-like 
 ghi-r.1   107895204   scarecrow-like protein 21 
 ghi-r.1   107917917   scarecrow-like protein 21 
 cit-r.1   102607440   chitin-inducible gibberellin-responsive protein 1-like 
 gma-u.5   100775665   scarecrow-like protein 21 
 gma-u.5   100817877   chitin-inducible gibberellin-responsive protein 1 
 gma-u.5   100799073   chitin-inducible gibberellin-responsive protein 1 
 vvi-u.5   100267541   chitin-inducible gibberellin-responsive protein 1 
 ppo-u.5   7470916   chitin-inducible gibberellin-responsive protein 1 
 ppo-u.5   112325951   scarecrow-like protein 21 
 mtr-u.5   11413533   scarecrow-like protein 21 
 sly-u.5   101055602   Hop-interacting protein THI039 
 sly-u.5   GRAS2   GRAS2 protein 
 sot-r.1   102578160   scarecrow-like protein 21 
 sot-r.1   102582834   scarecrow-like protein 21 
 nta-r.1   107804100   scarecrow-like protein 21 
 nta-r.1   107797265   scarecrow-like protein 21 
 nta-r.1   107786387   scarecrow-like protein 21 
 osa-u.5   4343521   chitin-inducible gibberellin-responsive protein 1-like 
 zma-u.5   100273879   uncharacterized LOC100273879 
 tae-r.2   123188366   chitin-inducible gibberellin-responsive protein 1 
 tae-r.2   123052485   chitin-inducible gibberellin-responsive protein 1 
 tae-r.2   123044610   chitin-inducible gibberellin-responsive protein 1 
 hvu-r.1   123425796   chitin-inducible gibberellin-responsive protein 1 
 sbi-r.1   8084092   chitin-inducible gibberellin-responsive protein 1 
 bdi-r.1   100829571   chitin-inducible gibberellin-responsive protein 1 

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Top 50 coexpressed genes to 107939645 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107939645 (ghi-r.1 coexpression data)

CoexMap"107939645"


ghiLOC107939645 | Entrez gene ID : 107939645    
Species ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi bra bna cre ath
Paralog 4 1 3 1 2 1 2 2 3 1 1 3 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016728495.1 [sequence] [blastp]
XP_016728496.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 3  (predict for XP_016728495.1)
chlo 4,  nucl 4,  mito 3  (predict for XP_016728496.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_016728495.1)
mito 3  (predict for XP_016728496.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107939645
ghi-r.1
for
107939640
ghi-r.1
for
107895204
ghi-r.1
for
107917917
cit-r.1
for
102607440
gma-u.5
for
100775665
gma-u.5
for
100817877
gma-u.5
for
100799073
vvi-u.5
for
100267541
ppo-u.5
for
7470916
ppo-u.5
for
112325951
mtr-u.5
for
11413533
sly-u.5
for
101055602
sly-u.5
for
GRAS2
sot-r.1
for
102578160
sot-r.1
for
102582834
nta-r.1
for
107804100
nta-r.1
for
107797265
nta-r.1
for
107786387
osa-u.5
for
4343521
zma-u.5
for
100273879
tae-r.2
for
123188366
tae-r.2
for
123052485
tae-r.2
for
123044610
hvu-r.1
for
123425796
sbi-r.1
for
8084092
bdi-r.1
for
100829571


Ortholog ID: 7476
Species ghi ghi ghi cit gma gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107939645 LOC107939640 LOC107917917 LOC102607440 LOC100817877 LOC100799073 LOC100797644 LOC100267541 LOC7470916 LOC112325951 LOC11413533 LOC101055602 GRAS2 LOC102578160 LOC102582834 LOC107797265 LOC107786387 LOC107774886 LOC4343521 LOC100273879 LOC123188366 LOC123052485 LOC123044610 LOC123425796 LOC8084092 LOC100829571
Function* scarecrow-like protein 21 chitin-inducible gibberellin-responsive protein 1-like scarecrow-like protein 21 chitin-inducible gibberellin-responsive protein 1-like chitin-inducible gibberellin-responsive protein 1 chitin-inducible gibberellin-responsive protein 1 scarecrow-like protein 21 chitin-inducible gibberellin-responsive protein 1 chitin-inducible gibberellin-responsive protein 1 scarecrow-like protein 21 scarecrow-like protein 21 Hop-interacting protein THI039 GRAS2 protein scarecrow-like protein 21 scarecrow-like protein 21 scarecrow-like protein 21 scarecrow-like protein 21 scarecrow-like protein 21 chitin-inducible gibberellin-responsive protein 1-like uncharacterized LOC100273879 chitin-inducible gibberellin-responsive protein 1 chitin-inducible gibberellin-responsive protein 1 chitin-inducible gibberellin-responsive protein 1 chitin-inducible gibberellin-responsive protein 1 chitin-inducible gibberellin-responsive protein 1 chitin-inducible gibberellin-responsive protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 3
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 5
sly00592 alpha-Linolenic acid metabolism 3
sly04626 Plant-pathogen interaction 2
sly00561 Glycerolipid metabolism 2
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00591 Linoleic acid metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00591 Linoleic acid metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00591 Linoleic acid metabolism 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 3
tae00650 Butanoate metabolism 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107939645 107939640 107917917 102607440 100817877 100799073 100797644 100267541 7470916 112325951 11413533 101055602 100301918 102578160 102582834 107797265 107786387 107774886 4343521 100273879 123188366 123052485 123044610 123425796 8084092 100829571
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