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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107940052   DDB1- and CUL4-associated factor homolog 1 
 ghi-r.1   107948687   DDB1- and CUL4-associated factor homolog 1 
 ath-u.5   DCAF1   DDB1-CUL4 associated factor 1 
 bra-r.6   103862033   DDB1- and CUL4-associated factor homolog 1 
 bra-r.6   103834625   DDB1- and CUL4-associated factor homolog 1 
 bna-r.1   106390039   DDB1- and CUL4-associated factor homolog 1-like 
 bna-r.1   106409322   DDB1- and CUL4-associated factor homolog 1 
 bna-r.1   106409323   DDB1- and CUL4-associated factor homolog 1 
 cit-r.1   102628260   DDB1- and CUL4-associated factor homolog 1 
 gma-u.5   100800133   DDB1- and CUL4-associated factor homolog 1 
 gma-u.5   100796030   DDB1- and CUL4-associated factor homolog 1 
 gma-u.5   100789761   DDB1- and CUL4-associated factor homolog 1 
 vvi-u.5   100254299   DDB1- and CUL4-associated factor homolog 1 
 ppo-u.5   18100804   DDB1- and CUL4-associated factor homolog 1 
 mtr-u.5   11427341   DDB1- and CUL4-associated factor homolog 1 
 sly-u.5   101254121   DDB1- and CUL4-associated factor homolog 1 
 sot-r.1   102588054   DDB1- and CUL4-associated factor homolog 1 
 nta-r.1   107822817   DDB1- and CUL4-associated factor homolog 1 
 nta-r.1   107796179   DDB1- and CUL4-associated factor homolog 1 
 osa-u.5   107280668   DDB1- and CUL4-associated factor homolog 1 
 zma-u.5   103646181   DDB1- and CUL4-associated factor homolog 1 
 zma-u.5   100502197   uncharacterized LOC100502197 
 tae-r.2   123191206   DDB1- and CUL4-associated factor homolog 1 
 tae-r.2   123055392   DDB1- and CUL4-associated factor homolog 1 
 hvu-r.1   123428539   DDB1- and CUL4-associated factor homolog 1 
 sbi-r.1   8076518   DDB1- and CUL4-associated factor homolog 1 
 bdi-r.1   100837527   DDB1- and CUL4-associated factor homolog 1 
 cre-r.1   CHLRE_17g725450v5   uncharacterized protein 

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Top 50 coexpressed genes to 107940052 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107940052 (ghi-r.1 coexpression data)

CoexMap"107940052"


ghiLOC107940052 | Entrez gene ID : 107940052    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 3 1 3 1 1 1 1 1 2 1 2 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (59 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016728948.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  cysk 1  (predict for XP_016728948.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016728948.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107940052
ghi-r.1
for
107948687
ath-u.5
for
DCAF1
bra-r.6
for
103862033
bra-r.6
for
103834625
bna-r.1
for
106390039
bna-r.1
for
106409322
bna-r.1
for
106409323
cit-r.1
for
102628260
gma-u.5
for
100800133
gma-u.5
for
100796030
gma-u.5
for
100789761
vvi-u.5
for
100254299
ppo-u.5
for
18100804
mtr-u.5
for
11427341
sly-u.5
for
101254121
sot-r.1
for
102588054
nta-r.1
for
107822817
nta-r.1
for
107796179
osa-u.5
for
107280668
zma-u.5
for
103646181
zma-u.5
for
100502197
tae-r.2
for
123191206
tae-r.2
for
123055392
hvu-r.1
for
123428539
sbi-r.1
for
8076518
bdi-r.1
for
100837527
cre-r.1
for
CHLRE_17g725450v5


Ortholog ID: 8108
Species ghi ghi ath bra bra bna bna bna cit gma gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC107940052 LOC107948687 DCAF1 LOC103862033 LOC103834625 LOC106390039 LOC106409322 LOC106409323 LOC102628260 LOC100800133 LOC100796030 LOC100789761 LOC100254299 LOC18100804 LOC11427341 LOC101254121 LOC102588054 LOC107822817 LOC107796179 LOC107280668 LOC103646181 LOC100502197 LOC123191206 LOC123055392 LOC123428539 LOC8076518 LOC100837527 CHLRE_17g725450v5
Function* DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1-CUL4 associated factor 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1-like DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 uncharacterized LOC100502197 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 DDB1- and CUL4-associated factor homolog 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi00230 Purine metabolism 3
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi00230 Purine metabolism 3
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 5
bra03008 Ribosome biogenesis in eukaryotes 3
bra03250 Viral life cycle - HIV-1 2
bra03040 Spliceosome 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit03013 Nucleocytoplasmic transport 2
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 3
gma04136 Autophagy - other 2
gma03083 Polycomb repressive complex 2
gma03250 Viral life cycle - HIV-1 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03082 ATP-dependent chromatin remodeling 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo03083 Polycomb repressive complex 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03083 Polycomb repressive complex 2
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107940052 107948687 829244 103862033 103834625 106390039 106409322 106409323 102628260 100800133 100796030 100789761 100254299 18100804 11427341 101254121 102588054 107822817 107796179 107280668 103646181 100502197 123191206 123055392 123428539 8076518 100837527 5722771
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