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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107940053   ubiquitin carboxyl-terminal hydrolase 23 
 ath-u.5   UBP23   ubiquitin-specific protease 23 
 gma-u.5   100798267   ubiquitin carboxyl-terminal hydrolase 23 
 gma-u.5   100786606   ubiquitin carboxyl-terminal hydrolase 23-like 
 vvi-u.5   100248233   ubiquitin carboxyl-terminal hydrolase 23 
 vvi-u.5   100246880   ubiquitin carboxyl-terminal hydrolase 23 
 vvi-u.5   109122241   uncharacterized LOC109122241 
 ppo-u.5   7465955   ubiquitin carboxyl-terminal hydrolase 23 
 ppo-u.5   7493399   ubiquitin carboxyl-terminal hydrolase 23 
 mtr-u.5   11446416   ubiquitin carboxyl-terminal hydrolase 23 
 sly-u.5   101266236   ubiquitin carboxyl-terminal hydrolase 23 
 osa-u.5   4340327   ubiquitin carboxyl-terminal hydrolase 23 
 zma-u.5   103637980   ubiquitin carboxyl-terminal hydrolase 23 

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Top 50 coexpressed genes to 107940053 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107940053 (ghi-r.1 coexpression data)

CoexMap"107940053"


ghiLOC107940053 | Entrez gene ID : 107940053    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 1 2 3 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016579 [list] [network] protein deubiquitination  (190 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (141 genes)  IEA  
Protein XP_016728949.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016728949.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016728949.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107940053

.
ath-u.5
for
UBP23

.
gma-u.5
for
100798267

.
gma-u.5
for
100786606

.
vvi-u.5
for
100248233

.
vvi-u.5
for
100246880

.
vvi-u.5
for
109122241

.
ppo-u.5
for
7465955

.
ppo-u.5
for
7493399

.
mtr-u.5
for
11446416

.
sly-u.5
for
101266236

.
osa-u.5
for
4340327

.
zma-u.5
for
103637980

.


Ortholog ID: 5866
Species ath gma gma sly osa zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol UBP23 LOC100798267 LOC100786606 LOC101266236 LOC4340327 LOC103637980 LOC103856721 LOC103845235 LOC100246880 LOC100248233 LOC7493399 LOC7465955 LOC11446416 LOC123151377 LOC123170301 LOC123410793 LOC107906901 LOC107958935 LOC106388485 LOC106407782 CHLRE_14g629300v5 LOC8065417 LOC102589967 LOC102631348 LOC100826635 LOC107814948 LOC107820487
Function* ubiquitin-specific protease 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23-like ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23-like ubiquitin carboxyl-terminal hydrolase 23-like uncharacterized protein ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23 ubiquitin carboxyl-terminal hydrolase 23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly03040 Spliceosome 2
sly03008 Ribosome biogenesis in eukaryotes 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa03015 mRNA surveillance pathway 3
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03015 mRNA surveillance pathway 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 5
bra04145 Phagosome 2
bra04517 IgSF CAM signaling 2
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 3
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 3
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot04144 Endocytosis 3
sot04141 Protein processing in endoplasmic reticulum 3
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835910 100798267 100786606 101266236 4340327 103637980 103856721 103845235 100246880 100248233 7493399 7465955 11446416 123151377 123170301 123410793 107906901 107958935 106388485 106407782 5718367 8065417 102589967 102631348 100826635 107814948 107820487
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