ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107940643	protein PSK SIMULATOR 3
ghi-r.1	107905351	protein PSK SIMULATOR 1
ghi-r.1	107892047	protein PSK SIMULATOR 1
ghi-r.1	107908722	protein PSK SIMULATOR 1
ath-u.5	AT5G04550	type-1 restriction enzyme mjaxp r protein (DUF668)
ath-u.5	AT5G51670	hypothetical protein (DUF668)
bra-r.6	103850552	uncharacterized LOC103850552
bra-r.6	103852132	uncharacterized LOC103852132
bra-r.6	103847279	uncharacterized LOC103847279
bna-r.1	106433126	uncharacterized LOC106433126
bna-r.1	111204231	uncharacterized LOC111204231
bna-r.1	106372502	uncharacterized LOC106372502
cit-r.1	102608514	protein PSK SIMULATOR 1
cit-r.1	102618914	uncharacterized LOC102618914
cit-r.1	102624656	hypothetical protein
gma-u.5	100816462	protein PSK SIMULATOR 3
gma-u.5	100808409	protein PSK SIMULATOR 1
gma-u.5	100804666	uncharacterized LOC100804666
vvi-u.5	100244314	uncharacterized LOC100244314
vvi-u.5	100256698	protein PSK SIMULATOR 1
vvi-u.5	100243738	uncharacterized LOC100243738
ppo-u.5	7494903	protein PSK SIMULATOR 1
ppo-u.5	7463484	protein PSK SIMULATOR 1
ppo-u.5	7482137	protein PSK SIMULATOR 1
mtr-u.5	11430507	protein PSK SIMULATOR 1
mtr-u.5	11427964	uncharacterized LOC11427964
mtr-u.5	11441466	protein PSK SIMULATOR 3
sly-u.5	101245820	protein PSK SIMULATOR 1
sly-u.5	101246082	uncharacterized LOC101246082
sly-u.5	101254856	protein PSK SIMULATOR 2
sot-r.1	102604731	uncharacterized LOC102604731
sot-r.1	102598109	uncharacterized LOC102598109
sot-r.1	102581586	uncharacterized LOC102581586
nta-r.1	107805864	uncharacterized LOC107805864
nta-r.1	107775164	protein PSK SIMULATOR 1-like
nta-r.1	107770950	protein PSK SIMULATOR 1-like
osa-u.5	4334852	protein PSK SIMULATOR 1
osa-u.5	4351496	protein PSK SIMULATOR 3
zma-u.5	100277681	DUF3475 domain protein
tae-r.2	123087469	uncharacterized LOC123087469
tae-r.2	123106825	uncharacterized LOC123106825
tae-r.2	123114461	uncharacterized LOC123114461
hvu-r.1	123395225	uncharacterized LOC123395225
hvu-r.1	123395828	uncharacterized LOC123395828
sbi-r.1	8059245	uncharacterized LOC8059245
bdi-r.1	100824242	uncharacterized LOC100824242
bdi-r.1	100840563	uncharacterized LOC100840563

Top 50 coexpressed genes to 107940643 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107940643 (ghi-r.1 coexpression data)

CoexMap"107940643"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0045927 [list] [network] positive regulation of growth

(47 genes)

IEA

GO CC

GO MF

Protein

XP_016729566.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, cyto 3, nucl 2, cyto_plas 2

(predict for XP_016729566.1)

Subcellular
localization
TargetP

other 5

(predict for XP_016729566.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107940643	ghi-r.1 for 107905351	ghi-r.1 for 107892047	ghi-r.1 for 107908722	ath-u.5 for AT5G04550	ath-u.5 for AT5G51670	bra-r.6 for 103850552	bra-r.6 for 103852132	bra-r.6 for 103847279	bna-r.1 for 106433126	bna-r.1 for 111204231	bna-r.1 for 106372502	cit-r.1 for 102608514	cit-r.1 for 102618914	cit-r.1 for 102624656	gma-u.5 for 100816462	gma-u.5 for 100808409	gma-u.5 for 100804666	vvi-u.5 for 100244314	vvi-u.5 for 100256698	vvi-u.5 for 100243738	ppo-u.5 for 7494903	ppo-u.5 for 7463484	ppo-u.5 for 7482137	mtr-u.5 for 11430507	mtr-u.5 for 11427964	mtr-u.5 for 11441466	sly-u.5 for 101245820	sly-u.5 for 101246082	sly-u.5 for 101254856	sot-r.1 for 102604731	sot-r.1 for 102598109	sot-r.1 for 102581586	nta-r.1 for 107805864	nta-r.1 for 107775164	nta-r.1 for 107770950	osa-u.5 for 4334852	osa-u.5 for 4351496	zma-u.5 for 100277681	tae-r.2 for 123087469	tae-r.2 for 123106825	tae-r.2 for 123114461	hvu-r.1 for 123395225	hvu-r.1 for 123395828	sbi-r.1 for 8059245	bdi-r.1 for 100824242	bdi-r.1 for 100840563

Ortholog

Ortholog ID: 1398

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

protein PSK SIMULATOR 3

protein PSK SIMULATOR 1

type-1 restriction enzyme mjaxp r protein (DUF668)

hypothetical protein (DUF668)

uncharacterized LOC103850552

uncharacterized LOC103852132

uncharacterized LOC103847279

uncharacterized LOC106433126

uncharacterized LOC111204231

protein PSK SIMULATOR 1

uncharacterized LOC102618914

hypothetical protein

uncharacterized LOC100804666

protein PSK SIMULATOR 1

uncharacterized LOC100244314

protein PSK SIMULATOR 1

uncharacterized LOC100243738

protein PSK SIMULATOR 1

uncharacterized LOC18100080

protein PSK SIMULATOR 1

protein PSK SIMULATOR 3

protein PSK SIMULATOR 1

uncharacterized LOC101246082

protein PSK SIMULATOR 2

uncharacterized LOC102604731

uncharacterized LOC102598109

uncharacterized LOC102581586

protein PSK SIMULATOR 1-like

uncharacterized LOC107816328

protein PSK SIMULATOR 1

protein PSK SIMULATOR 3

DUF3475 domain protein

uncharacterized LOC123087469

uncharacterized LOC123106825

uncharacterized LOC123120261

uncharacterized LOC123395225

uncharacterized LOC123395828

uncharacterized LOC8059245

uncharacterized LOC100824242

uncharacterized LOC100840563

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	2
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00051	Fructose and mannose metabolism	2
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	3
bna00051	Fructose and mannose metabolism	2
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00943	Isoflavonoid biosynthesis	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00910	Nitrogen metabolism	3
vvi01310	Nitrogen cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	3
vvi04016	MAPK signaling pathway - plant	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	3
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00943	Isoflavonoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	2
mtr04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	3
sly04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00905	Brassinosteroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03272	Virion - Hepatitis viruses	2
nta04144	Endocytosis	2
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3

Expression

Expression pattern

Entrez Gene ID^*

107940643

107905351

107927576

830334

835241

103850552

103852132

103847279

106433126

111204231

106412335

102608514

102618914

102624656

100804666

100779328

100809482

100244314

100256698

100243738

7463484

7482137

18100080

11430507

11441466

25497139

101245820

101246082

101254856

102604731

102598109

102581586

107770950

107770522

107816328

4334852

4351496

100277681

123087469

123106825

123120261

123395225

123395828

8059245

100824242

100840563

The preparation time of this page was 0.5 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	3	3	3	3	3	3	3	3	3	2	1	3	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107940643 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107940643 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**