Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107941372   4-coumarate--CoA ligase-like 6 
 ath-u.5   AT4G19010   AMP-dependent synthetase and ligase family protein 
 gma-u.5   100804808   4-coumarate--CoA ligase-like 6 
 vvi-u.5   100261471   4-coumarate--CoA ligase-like 6 
 mtr-u.5   11410073   4-coumarate--CoA ligase-like 6 
 mtr-u.5   11406508   4-coumarate--CoA ligase-like 6 
 mtr-u.5   11441228   4-coumarate--CoA ligase-like 6 
 sly-u.5   101255909   4-coumarate--CoA ligase-like 6 
 osa-u.5   9272068   4-coumarate--CoA ligase-like 2 
 zma-u.5   103637741   4-coumarate--CoA ligase-like 3 

close


Top 50 coexpressed genes to 107941372 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107941372 (ghi-r.1 coexpression data)

CoexMap"107941372"


ghiLOC107941372 | Entrez gene ID : 107941372    
Species ghi ath gma vvi mtr sly osa zma sbi nta bra cre hvu cit bdi ppo sot tae bna
Paralog 1 1 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (102 genes)
ghi00940 [list] [network] Phenylpropanoid biosynthesis (349 genes)
GO BP
GO:0006744 [list] [network] ubiquinone biosynthetic process  (32 genes)  IEA  
GO CC
GO:0005777 [list] [network] peroxisome  (232 genes)  IEA  
GO MF
GO:0016405 [list] [network] CoA-ligase activity  (67 genes)  IEA  
Protein XP_040960259.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  plas 2,  chlo 2,  cyto_nucl 2,  mito_plas 1  (predict for XP_040960259.1)
Subcellular
localization
TargetP
other 6  (predict for XP_040960259.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107941372

.
ath-u.5
for
AT4G19010

.
gma-u.5
for
100804808

.
vvi-u.5
for
100261471

.
mtr-u.5
for
11410073

.
mtr-u.5
for
11406508

.
mtr-u.5
for
11441228

.
sly-u.5
for
101255909

.
osa-u.5
for
9272068

.
zma-u.5
for
103637741

.


Ortholog ID: 9025
Species ath gma sly osa zma bra vvi mtr mtr tae tae ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT4G19010 LOC100804808 LOC101255909 LOC9272068 LOC103637741 LOC103857048 LOC100261471 LOC11441228 LOC11410073 LOC123050793 LOC123091620 LOC107938562 LOC107942427 LOC106431820 LOC106423208 LOC8055123 LOC102589793 LOC102613925 LOC100842361 LOC107793030 LOC107826655
Function* AMP-dependent synthetase and ligase family protein 4-coumarate--CoA ligase-like 6 4-coumarate--CoA ligase-like 6 4-coumarate--CoA ligase-like 2 4-coumarate--CoA ligase-like 3 4-coumarate--CoA ligase-like 6 4-coumarate--CoA ligase-like 6 4-coumarate--CoA ligase-like 6 4-coumarate--CoA ligase-like 6 4-coumarate--CoA ligase-like 3 4-coumarate--CoA ligase-like 3 4-coumarate--CoA ligase-like 6 4-coumarate--CoA ligase-like 6 4-coumarate--CoA ligase-like 6 4-coumarate--CoA ligase-like 6 4-coumarate--CoA ligase-like 3 4-coumarate--CoA ligase-like 6 4-coumarate--CoA ligase-like 6 4-coumarate--CoA ligase-like 3 4-coumarate--CoA ligase-like 6 4-coumarate--CoA ligase-like 6
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00630 Glyoxylate and dicarboxylate metabolism 6
osa01200 Carbon metabolism 5
osa01230 Biosynthesis of amino acids 4
osa00260 Glycine, serine and threonine metabolism 3
osa00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
mtr00010 Glycolysis / Gluconeogenesis 3
mtr01200 Carbon metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
mtr00940 Phenylpropanoid biosynthesis 3
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 4
ghi04141 Protein processing in endoplasmic reticulum 4
ghi00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00941 Flavonoid biosynthesis 3
bdi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bdi00940 Phenylpropanoid biosynthesis 2
bdi00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827639 100804808 101255909 9272068 103637741 103857048 100261471 11441228 11410073 123050793 123091620 107938562 107942427 106431820 106423208 8055123 102589793 102613925 100842361 107793030 107826655
The preparation time of this page was 0.1 [sec].