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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107941620   ubiquitin-conjugating enzyme E2 36 
 ghi-r.1   107895234   ubiquitin-conjugating enzyme E2 36 
 ghi-r.1   107915831   ubiquitin-conjugating enzyme E2 36 
 ghi-r.1   107918116   ubiquitin-conjugating enzyme E2 36 
 ath-u.5   UBC36   ubiquitin-conjugating enzyme 36 
 ath-u.5   UBC35   ubiquitin-conjugating enzyme 35 
 bra-r.6   103853148   ubiquitin-conjugating enzyme E2 36 
 bra-r.6   103872474   ubiquitin-conjugating enzyme E2 36 
 bra-r.6   103832364   ubiquitin-conjugating enzyme E2 36 
 bna-r.1   125589184   ubiquitin-conjugating enzyme E2 36-like 
 bna-r.1   106354668   ubiquitin-conjugating enzyme E2 36 
 bna-r.1   106346741   ubiquitin-conjugating enzyme E2 36 
 cit-r.1   102577935   ubiquitin-conjugating enzyme 13 
 cit-r.1   102609816   ubiquitin-conjugating enzyme E2 36 
 gma-u.5   100805631   ubiquitin-conjugating enzyme E2 35-like 
 gma-u.5   100804355   ubiquitin-conjugating enzyme E2 36 
 gma-u.5   100500231   uncharacterized LOC100500231 
 vvi-u.5   100255523   ubiquitin-conjugating enzyme E2 36 
 vvi-u.5   100254005   ubiquitin-conjugating enzyme E2-like 
 ppo-u.5   7455955   ubiquitin-conjugating enzyme E2 35 
 ppo-u.5   18095503   ubiquitin-conjugating enzyme E2 36 
 mtr-u.5   120575836   ubiquitin-conjugating enzyme E2 36 
 mtr-u.5   25487247   ubiquitin-conjugating enzyme E2 35 
 sly-u.5   Ubc13-2   ubiquitin-conjugating enzyme E2 36-like 
 sly-u.5   Fni3   ubiquitin-conjugating enzyme E2 35-like 
 sot-r.1   102586208   ubiquitin-conjugating enzyme E2 36-like 
 sot-r.1   102604957   ubiquitin-conjugating enzyme E2 36-like 
 nta-r.1   107817632   ubiquitin-conjugating enzyme E2 35 
 nta-r.1   107817127   ubiquitin-conjugating enzyme E2 36 
 nta-r.1   107789165   ubiquitin-conjugating enzyme E2 36 
 zma-u.5   100281972   ubiquitin-conjugating enzyme E2 N 
 zma-u.5   103651370   ubiquitin-conjugating enzyme E2 36 
 zma-u.5   100272559   putative ubiquitin-conjugating enzyme family 
 tae-r.2   123070602   ubiquitin-conjugating enzyme E2 36 
 tae-r.2   123061913   ubiquitin-conjugating enzyme E2 36 
 tae-r.2   123068018   ubiquitin-conjugating enzyme E2 36 
 hvu-r.1   123395686   ubiquitin-conjugating enzyme E2 36-like 
 hvu-r.1   123444079   ubiquitin-conjugating enzyme E2 36 
 hvu-r.1   123450106   ubiquitin-conjugating enzyme E2 36-like 
 sbi-r.1   8068001   ubiquitin-conjugating enzyme E2 36 
 sbi-r.1   110432875   ubiquitin-conjugating enzyme E2 36-like 
 bdi-r.1   100825911   ubiquitin-conjugating enzyme E2 36 
 cre-r.1   CHLRE_01g026600v5   uncharacterized protein 

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Top 50 coexpressed genes to 107941620 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107941620 (ghi-r.1 coexpression data)

CoexMap"107941620"


ghiLOC107941620 | Entrez gene ID : 107941620    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi cre osa
Paralog 4 2 3 3 2 3 2 2 2 2 2 3 3 3 3 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04120 [list] [network] Ubiquitin mediated proteolysis (368 genes)
GO BP
GO:0070534 [list] [network] protein K63-linked ubiquitination  (22 genes)  IEA  
GO:0006301 [list] [network] DNA damage tolerance  (40 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (56 genes)  IEA  
Protein XP_016730677.1 [sequence] [blastp]
XP_016730678.1 [sequence] [blastp]
XP_040948151.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 4,  vacu 1  (predict for XP_016730677.1)
mito 5,  cyto 2,  cyto_mito 2,  mito_plas 2  (predict for XP_016730678.1)
nucl 6,  cyto_nucl 4,  mito 3  (predict for XP_040948151.1)
Subcellular
localization
TargetP
scret 6,  mito 4  (predict for XP_016730677.1)
other 5,  mito 3  (predict for XP_016730678.1)
other 5,  mito 3  (predict for XP_040948151.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107941620
ghi-r.1
for
107895234
ghi-r.1
for
107915831
ghi-r.1
for
107918116
ath-u.5
for
UBC36
ath-u.5
for
UBC35
bra-r.6
for
103853148
bra-r.6
for
103872474
bra-r.6
for
103832364
bna-r.1
for
125589184
bna-r.1
for
106354668
bna-r.1
for
106346741
cit-r.1
for
102577935
cit-r.1
for
102609816
gma-u.5
for
100805631
gma-u.5
for
100804355
gma-u.5
for
100500231
vvi-u.5
for
100255523
vvi-u.5
for
100254005
ppo-u.5
for
7455955
ppo-u.5
for
18095503
mtr-u.5
for
120575836
mtr-u.5
for
25487247
sly-u.5
for
Ubc13-2
sly-u.5
for
Fni3
sot-r.1
for
102586208
sot-r.1
for
102604957
nta-r.1
for
107817632
nta-r.1
for
107817127
nta-r.1
for
107789165
zma-u.5
for
100281972
zma-u.5
for
103651370
zma-u.5
for
100272559
tae-r.2
for
123070602
tae-r.2
for
123061913
tae-r.2
for
123068018
hvu-r.1
for
123395686
hvu-r.1
for
123444079
hvu-r.1
for
123450106
sbi-r.1
for
8068001
sbi-r.1
for
110432875
bdi-r.1
for
100825911
cre-r.1
for
CHLRE_01g026600v5


Ortholog ID: 1889
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta nta zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi cre
Symbol LOC107915831 LOC107918116 LOC107886608 UBC36 UBC35 LOC103832364 LOC103835981 LOC103842824 LOC106405674 LOC106415137 LOC106353433 LOC102577935 LOC102609816 LOC100804355 LOC100500231 LOC100306707 LOC100255523 LOC100254005 LOC7455955 LOC18095503 LOC120575836 LOC25487247 Ubc13-2 Fni3 LOC102586208 LOC102604957 LOC107817632 LOC107789165 LOC107763735 LOC100281972 LOC103651370 LOC101202705 LOC123068018 LOC123111694 LOC123121237 LOC123395686 LOC123444079 LOC123450106 LOC8068001 LOC110432875 LOC100825911 CHLRE_01g026600v5
Function* ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 35 ubiquitin-conjugating enzyme 36 ubiquitin-conjugating enzyme 35 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 35 ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme 13 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36 uncharacterized LOC100500231 uncharacterized LOC100306707 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2-like ubiquitin-conjugating enzyme E2 35 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 35 ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme E2 35-like ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme E2 35 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 35 ubiquitin-conjugating enzyme E2 N ubiquitin-conjugating enzyme E2 36 putative ubiquitin-conjugating enzyme family ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme E2 36 ubiquitin-conjugating enzyme E2 36-like ubiquitin-conjugating enzyme E2 36 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 10
ghi04130 SNARE interactions in vesicular transport 4
ghi03083 Polycomb repressive complex 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 10
ghi04130 SNARE interactions in vesicular transport 4
ghi03083 Polycomb repressive complex 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
ghi04141 Protein processing in endoplasmic reticulum 6
ghi04130 SNARE interactions in vesicular transport 2
ghi03083 Polycomb repressive complex 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath04136 Autophagy - other 2
ath00190 Oxidative phosphorylation 2
ath04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath00350 Tyrosine metabolism 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 8
bna00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 8
bna00480 Glutathione metabolism 4
bna00280 Valine, leucine and isoleucine degradation 2
bna00650 Butanoate metabolism 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 4
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 4
cit03050 Proteasome 3
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 7
gma04120 Ubiquitin mediated proteolysis 5
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma03050 Proteasome 3
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 7
gma04141 Protein processing in endoplasmic reticulum 2
gma00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 4
ppo04120 Ubiquitin mediated proteolysis 3
ppo04144 Endocytosis 3
ppo04130 SNARE interactions in vesicular transport 3
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 4
ppo04120 Ubiquitin mediated proteolysis 3
ppo04130 SNARE interactions in vesicular transport 3
ppo04144 Endocytosis 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 7
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot00190 Oxidative phosphorylation 2
sot03050 Proteasome 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot04120 Ubiquitin mediated proteolysis 3
sot00010 Glycolysis / Gluconeogenesis 2
sot00020 Citrate cycle (TCA cycle) 2
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 11
nta04141 Protein processing in endoplasmic reticulum 6
nta03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 7
nta04141 Protein processing in endoplasmic reticulum 3
nta03015 mRNA surveillance pathway 2
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 7
zma03083 Polycomb repressive complex 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 9
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae03015 mRNA surveillance pathway 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu04130 SNARE interactions in vesicular transport 2
hvu04144 Endocytosis 2
hvu04136 Autophagy - other 2
hvu00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu03050 Proteasome 2
hvu04144 Endocytosis 2
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
sbi00190 Oxidative phosphorylation 3
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03060 Protein export 2
sbi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 4
sbi04120 Ubiquitin mediated proteolysis 3
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107915831 107918116 107886608 838260 844224 103832364 103835981 103842824 106405674 106415137 106353433 102577935 102609816 100804355 100500231 100306707 100255523 100254005 7455955 18095503 120575836 25487247 101262054 101266538 102586208 102604957 107817632 107789165 107763735 100281972 103651370 101202705 123068018 123111694 123121237 123395686 123444079 123450106 8068001 110432875 100825911 5715298
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