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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107942159   auxin-responsive protein IAA11-like 
 ghi-r.1   107923964   auxin-responsive protein IAA11-like 
 ghi-r.1   107923990   auxin-responsive protein IAA11 
 ghi-r.1   107929026   auxin-responsive protein IAA12 
 ath-u.5   IAA13   auxin-induced protein 13 
 ath-u.5   IAA11   indole-3-acetic acid inducible 11 
 ath-u.5   IAA12   AUX/IAA transcriptional regulator family protein 
 bra-r.6   103843644   auxin-responsive protein IAA12 
 bra-r.6   103861847   auxin-responsive protein IAA11 
 bra-r.6   103854273   auxin-responsive protein IAA11 
 bna-r.1   111206375   auxin-responsive protein IAA11-like 
 bna-r.1   125580633   auxin-responsive protein IAA11-like 
 bna-r.1   125578650   auxin-responsive protein IAA12-like 
 cit-r.1   102612365   auxin-responsive protein IAA11 
 cit-r.1   102624177   auxin-responsive protein IAA13 
 gma-u.5   100813788   auxin-responsive protein IAA13-like 
 gma-u.5   100779400   auxin-responsive protein IAA11 
 gma-u.5   100527033   auxin-responsive protein IAA11 
 vvi-u.5   100244630   auxin-responsive protein IAA11 
 vvi-u.5   100256286   auxin-responsive protein IAA13 
 ppo-u.5   7475425   auxin-responsive protein IAA13 
 ppo-u.5   7459543   auxin-responsive protein IAA11 
 ppo-u.5   7494754   auxin-responsive protein IAA13 
 mtr-u.5   25484206   auxin-responsive protein IAA11 
 sly-u.5   IAA5   auxin-regulated IAA5 
 sly-u.5   IAA13   auxin-responsive protein IAA13 
 sly-u.5   IAA12   auxin-responsive protein IAA12 
 sot-r.1   102591186   auxin-responsive protein IAA13-like 
 sot-r.1   102581585   auxin-responsive protein IAA13 
 sot-r.1   102585970   auxin-responsive protein IAA13 
 nta-r.1   107786124   auxin-responsive protein IAA13 
 nta-r.1   107801569   auxin-responsive protein IAA12 
 nta-r.1   107772558   auxin-responsive protein IAA13 
 osa-u.5   4331149   auxin-responsive protein IAA10-like 
 zma-u.5   100273242   uncharacterized LOC100273242 
 tae-r.2   123146179   auxin-responsive protein IAA10 
 tae-r.2   123139879   auxin-responsive protein IAA10 
 tae-r.2   123129002   auxin-responsive protein IAA10 
 hvu-r.1   123405979   auxin-responsive protein IAA10-like 
 sbi-r.1   8056449   auxin-responsive protein IAA10 
 bdi-r.1   100833893   auxin-responsive protein IAA10 

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Top 50 coexpressed genes to 107942159 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107942159 (ghi-r.1 coexpression data)

CoexMap"107942159"


ghiLOC107942159 | Entrez gene ID : 107942159    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 3 2 3 1 3 3 3 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04075 [list] [network] Plant hormone signal transduction (1215 genes)
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein NP_001314392.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 1,  extr 1,  chlo 1,  plas 1,  cyto_mito 1  (predict for NP_001314392.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001314392.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107942159
ghi-r.1
for
107923964
ghi-r.1
for
107923990
ghi-r.1
for
107929026
ath-u.5
for
IAA13
ath-u.5
for
IAA11
ath-u.5
for
IAA12
bra-r.6
for
103843644
bra-r.6
for
103861847
bra-r.6
for
103854273
bna-r.1
for
111206375
bna-r.1
for
125580633
bna-r.1
for
125578650
cit-r.1
for
102612365
cit-r.1
for
102624177
gma-u.5
for
100813788
gma-u.5
for
100779400
gma-u.5
for
100527033
vvi-u.5
for
100244630
vvi-u.5
for
100256286
ppo-u.5
for
7475425
ppo-u.5
for
7459543
ppo-u.5
for
7494754
mtr-u.5
for
25484206
sly-u.5
for
IAA5
sly-u.5
for
IAA13
sly-u.5
for
IAA12
sot-r.1
for
102591186
sot-r.1
for
102581585
sot-r.1
for
102585970
nta-r.1
for
107786124
nta-r.1
for
107801569
nta-r.1
for
107772558
osa-u.5
for
4331149
zma-u.5
for
100273242
tae-r.2
for
123146179
tae-r.2
for
123139879
tae-r.2
for
123129002
hvu-r.1
for
123405979
sbi-r.1
for
8056449
bdi-r.1
for
100833893


Ortholog ID: 2455
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit gma gma vvi vvi ppo ppo ppo mtr sly sly sly sot sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107942159 LOC107923990 LOC107952733 IAA13 IAA11 IAA12 LOC103843644 LOC103861847 LOC103857480 LOC106407193 LOC106370104 LOC106388029 LOC102612365 LOC102624177 LOC100779400 LOC100527033 LOC100244630 LOC100256286 LOC7475425 LOC7459543 LOC7494754 LOC25484206 IAA5 IAA13 IAA12 LOC102591186 LOC102581585 LOC102585970 LOC107786124 LOC107772558 LOC107779163 LOC4331149 LOC100273242 LOC123146179 LOC123139879 LOC123129002 LOC123405979 LOC8056449 LOC100833893
Function* auxin-responsive protein IAA11-like auxin-responsive protein IAA11 auxin-responsive protein IAA11 auxin-induced protein 13 indole-3-acetic acid inducible 11 AUX/IAA transcriptional regulator family protein auxin-responsive protein IAA12 auxin-responsive protein IAA11 auxin-responsive protein IAA13 auxin-responsive protein IAA11 auxin-responsive protein IAA12-like auxin-responsive protein IAA13 auxin-responsive protein IAA11 auxin-responsive protein IAA13 auxin-responsive protein IAA11 auxin-responsive protein IAA11 auxin-responsive protein IAA11 auxin-responsive protein IAA13 auxin-responsive protein IAA13 auxin-responsive protein IAA11 auxin-responsive protein IAA13 auxin-responsive protein IAA11 auxin-regulated IAA5 auxin-responsive protein IAA13 auxin-responsive protein IAA12 auxin-responsive protein IAA13-like auxin-responsive protein IAA13 auxin-responsive protein IAA13 auxin-responsive protein IAA13 auxin-responsive protein IAA13 auxin-responsive protein IAA11 auxin-responsive protein IAA10-like uncharacterized LOC100273242 auxin-responsive protein IAA10 auxin-responsive protein IAA10 auxin-responsive protein IAA10 auxin-responsive protein IAA10-like auxin-responsive protein IAA10 auxin-responsive protein IAA10
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 6
ghi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 7
bna00562 Inositol phosphate metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 7
bna00562 Inositol phosphate metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 6
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04075 Plant hormone signal transduction 3
tae00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
tae03083 Polycomb repressive complex 3
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107942159 107923990 107952733 817894 828982 839495 103843644 103861847 103857480 106407193 106370104 106388029 102612365 102624177 100779400 100527033 100244630 100256286 7475425 7459543 7494754 25484206 101055544 101055546 101055545 102591186 102581585 102585970 107786124 107772558 107779163 4331149 100273242 123146179 123139879 123129002 123405979 8056449 100833893
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