ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107942260	probable LRR receptor-like serine/threonine-protein kinase At4g36180
ghi-r.1	107907817	probable LRR receptor-like serine/threonine-protein kinase At4g36180
ghi-r.1	107913014	probable LRR receptor-like serine/threonine-protein kinase At4g36180
ghi-r.1	107957587	probable LRR receptor-like serine/threonine-protein kinase At4g36180
ath-u.5	AT4G36180	Leucine-rich receptor-like protein kinase family protein
ath-u.5	AT1G75640	Leucine-rich receptor-like protein kinase family protein
bra-r.6	103832010	probable LRR receptor-like serine/threonine-protein kinase At4g36180
bra-r.6	103869882	probable LRR receptor-like serine/threonine-protein kinase At4g36180
bna-r.1	106403012	probable LRR receptor-like serine/threonine-protein kinase At4g36180
bna-r.1	106447967	probable LRR receptor-like serine/threonine-protein kinase At4g36180
bna-r.1	106421537	probable LRR receptor-like serine/threonine-protein kinase At4g36180
cit-r.1	102610015	probable LRR receptor-like serine/threonine-protein kinase At4g36180
cit-r.1	102625603	probable LRR receptor-like serine/threonine-protein kinase At4g36180
gma-u.5	100305362	receptor-like protein kinase
gma-u.5	100795838	probable LRR receptor-like serine/threonine-protein kinase At4g36180
gma-u.5	100801571	probable LRR receptor-like serine/threonine-protein kinase At4g36180
vvi-u.5	100854147	probable LRR receptor-like serine/threonine-protein kinase At4g36180
ppo-u.5	7495532	probable LRR receptor-like serine/threonine-protein kinase At4g36180
mtr-u.5	11433249	probable LRR receptor-like serine/threonine-protein kinase At4g36180
mtr-u.5	11420537	probable LRR receptor-like serine/threonine-protein kinase At4g36180
sly-u.5	101245331	probable LRR receptor-like serine/threonine-protein kinase At4g36180
sly-u.5	101247216	probable LRR receptor-like serine/threonine-protein kinase At4g36180
sly-u.5	101252647	probable LRR receptor-like serine/threonine-protein kinase At4g36180
sot-r.1	102585552	probable LRR receptor-like serine/threonine-protein kinase At4g36180
sot-r.1	102580235	probable LRR receptor-like serine/threonine-protein kinase At4g36180
sot-r.1	102581602	probable LRR receptor-like serine/threonine-protein kinase At4g36180
nta-r.1	107763438	uncharacterized LOC107763438
nta-r.1	107806184	uncharacterized LOC107806184
nta-r.1	107791465	uncharacterized LOC107791465
osa-u.5	4336741	probable inactive leucine-rich repeat receptor kinase XIAO
zma-u.5	103646048	putative leucine-rich repeat receptor-like protein kinase family protein
zma-u.5	100501765	putative leucine-rich repeat receptor-like protein kinase family protein
tae-r.2	123054114	probable inactive leucine-rich repeat receptor kinase XIAO
tae-r.2	123190005	probable inactive leucine-rich repeat receptor kinase XIAO
tae-r.2	123046244	probable inactive leucine-rich repeat receptor kinase XIAO
hvu-r.1	123427441	probable inactive leucine-rich repeat receptor kinase XIAO
sbi-r.1	8060421	probable inactive leucine-rich repeat receptor kinase XIAO
bdi-r.1	100841505	probable inactive leucine-rich repeat receptor kinase XIAO

Top 50 coexpressed genes to 107942260 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107942260 (ghi-r.1 coexpression data)

CoexMap"107942260"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006468 [list] [network] protein phosphorylation

(3020 genes)

IEA

GO CC

GO MF

GO:0004672 [list] [network] protein kinase activity	(3116 genes)	IEA
GO:0005524 [list] [network] ATP binding	(5155 genes)	IEA
GO:0005515 [list] [network] protein binding	(10797 genes)	IEA

Protein

XP_016731374.2 [sequence] [blastp]
XP_016731375.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 7, vacu 1, E.R. 1, pero 1, golg 1, E.R._vacu 1	(predict for XP_016731374.2)
plas 7, E.R. 1, chlo 1, pero 1, E.R._vacu 1, cyto_E.R. 1	(predict for XP_016731375.2)

Subcellular
localization
TargetP

scret 9	(predict for XP_016731374.2)
scret 9	(predict for XP_016731375.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107942260	ghi-r.1 for 107907817	ghi-r.1 for 107913014	ghi-r.1 for 107957587	ath-u.5 for AT4G36180	ath-u.5 for AT1G75640	bra-r.6 for 103832010	bra-r.6 for 103869882	bna-r.1 for 106403012	bna-r.1 for 106447967	bna-r.1 for 106421537	cit-r.1 for 102610015	cit-r.1 for 102625603	gma-u.5 for 100305362	gma-u.5 for 100795838	gma-u.5 for 100801571	vvi-u.5 for 100854147	ppo-u.5 for 7495532	mtr-u.5 for 11433249	mtr-u.5 for 11420537	sly-u.5 for 101245331	sly-u.5 for 101247216	sly-u.5 for 101252647	sot-r.1 for 102585552	sot-r.1 for 102580235	sot-r.1 for 102581602	nta-r.1 for 107763438	nta-r.1 for 107806184	nta-r.1 for 107791465	osa-u.5 for 4336741	zma-u.5 for 103646048	zma-u.5 for 100501765	tae-r.2 for 123054114	tae-r.2 for 123190005	tae-r.2 for 123046244	hvu-r.1 for 123427441	sbi-r.1 for 8060421	bdi-r.1 for 100841505

Ortholog

Ortholog ID: 3255

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

probable LRR receptor-like serine/threonine-protein kinase At4g36180

Leucine-rich receptor-like protein kinase family protein

probable LRR receptor-like serine/threonine-protein kinase At4g36180

uncharacterized LOC107791465

uncharacterized LOC107791336

uncharacterized LOC107810701

probable inactive leucine-rich repeat receptor kinase XIAO

putative leucine-rich repeat receptor-like protein kinase family protein

probable inactive leucine-rich repeat receptor kinase XIAO

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04814	Motor proteins	4
bna04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	3
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00230	Purine metabolism	2
sot00240	Pyrimidine metabolism	2
sot00480	Glutathione metabolism	2
sot01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

107913014

107896608

107936573

829775

843899

103832010

103869882

106447967

106421537

106349593

102610015

102625603

100801571

100784917

100854147

7495532

11433249

11420537

101245331

101247216

101252647

102585552

102580235

102581602

107791465

107791336

107810701

4336741

103646048

100501765

123054114

123190005

123046244

123427441

8060421

100841505

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	3	2	3	1	1	2	3	3	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107942260 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107942260 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**