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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107942346   RHOMBOID-like protein 12, mitochondrial 
 ghi-r.1   107956023   RHOMBOID-like protein 12, mitochondrial 
 ghi-r.1   107941548   RHOMBOID-like protein 12, mitochondrial 
 ath-u.5   RBL12   RHOMBOID-like protein 12 
 bna-r.1   106346915   RHOMBOID-like protein 12, mitochondrial 
 bna-r.1   106427081   RHOMBOID-like protein 12, mitochondrial 
 cit-r.1   102607149   RHOMBOID-like protein 12, mitochondrial 
 gma-u.5   100819148   RHOMBOID-like protein 12, mitochondrial 
 vvi-u.5   100243209   RHOMBOID-like protein 12, mitochondrial 
 ppo-u.5   7462251   RHOMBOID-like protein 12, mitochondrial 
 mtr-u.5   25493900   RHOMBOID-like protein 12, mitochondrial 
 sly-u.5   101265106   RHOMBOID-like protein 12, mitochondrial 
 sot-r.1   102580895   RHOMBOID-like protein 12, mitochondrial 
 nta-r.1   107780709   RHOMBOID-like protein 12, mitochondrial 
 nta-r.1   107774755   RHOMBOID-like protein 12, mitochondrial 
 osa-u.5   4327031   RHOMBOID-like protein 12, mitochondrial 
 zma-u.5   100277739   uncharacterized LOC100277739 
 tae-r.2   123070864   RHOMBOID-like protein 12, mitochondrial 
 tae-r.2   123062139   RHOMBOID-like protein 12, mitochondrial 
 tae-r.2   123079254   RHOMBOID-like protein 12, mitochondrial 
 hvu-r.1   123444477   RHOMBOID-like protein 12, mitochondrial 
 sbi-r.1   8079237   RHOMBOID-like protein 12, mitochondrial 
 bdi-r.1   100829598   RHOMBOID-like protein 12, mitochondrial 

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Top 50 coexpressed genes to 107942346 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107942346 (ghi-r.1 coexpression data)

CoexMap"107942346"


ghiLOC107942346 | Entrez gene ID : 107942346    
Species ghi ath bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi bra cre
Paralog 3 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0016020 [list] [network] membrane  (8195 genes)  IEA  
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (287 genes)  IEA  
Protein XP_040959771.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  cyto 1,  E.R. 1,  cyto_mito 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_040959771.1)
Subcellular
localization
TargetP
scret 5,  mito 4  (predict for XP_040959771.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107942346
ghi-r.1
for
107956023
ghi-r.1
for
107941548
ath-u.5
for
RBL12
bna-r.1
for
106346915
bna-r.1
for
106427081
cit-r.1
for
102607149
gma-u.5
for
100819148
vvi-u.5
for
100243209
ppo-u.5
for
7462251
mtr-u.5
for
25493900
sly-u.5
for
101265106
sot-r.1
for
102580895
nta-r.1
for
107780709
nta-r.1
for
107774755
osa-u.5
for
4327031
zma-u.5
for
100277739
tae-r.2
for
123070864
tae-r.2
for
123062139
tae-r.2
for
123079254
hvu-r.1
for
123444477
sbi-r.1
for
8079237
bdi-r.1
for
100829598


Ortholog ID: 10464
Species ghi ghi ghi ath bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107942346 LOC107956023 LOC107941548 RBL12 LOC106346915 LOC106427081 LOC102607149 LOC100819148 LOC100243209 LOC7462251 LOC25493900 LOC101265106 LOC102580895 LOC107780709 LOC107774755 LOC4327031 LOC100277739 LOC123070864 LOC123062139 LOC123079254 LOC123444477 LOC8079237 LOC100829598
Function* RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12 RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial uncharacterized LOC100277739 RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial RHOMBOID-like protein 12, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 4
bna03022 Basal transcription factors 3
bna03420 Nucleotide excision repair 3
bna03018 RNA degradation 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 8
bna03018 RNA degradation 2
bna03040 Spliceosome 2
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 12
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly03040 Spliceosome 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta00061 Fatty acid biosynthesis 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta04145 Phagosome 4
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 2
nta00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 8
zma00020 Citrate cycle (TCA cycle) 3
zma01200 Carbon metabolism 3
zma03050 Proteasome 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae04712 Circadian rhythm - plant 2
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 7
tae00220 Arginine biosynthesis 4
tae01230 Biosynthesis of amino acids 4
tae00770 Pantothenate and CoA biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 8
tae00220 Arginine biosynthesis 6
tae01240 Biosynthesis of cofactors 4
tae01210 2-Oxocarboxylic acid metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 3
hvu03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107942346 107956023 107941548 838441 106346915 106427081 102607149 100819148 100243209 7462251 25493900 101265106 102580895 107780709 107774755 4327031 100277739 123070864 123062139 123079254 123444477 8079237 100829598
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