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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107942515   pentatricopeptide repeat-containing protein At5g61370, mitochondrial 
 ghi-r.1   107930577   EKC/KEOPS complex subunit TP53RK 
 ghi-r.1   107951264   pentatricopeptide repeat-containing protein At5g61370, mitochondrial 
 ghi-r.1   107931522   EKC/KEOPS complex subunit TP53RK 
 ath-u.5   AT5G26110   Protein kinase superfamily protein 
 ath-u.5   AT5G61370   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103860588   pentatricopeptide repeat-containing protein At5g61370, mitochondrial 
 bna-r.1   106428055   pentatricopeptide repeat-containing protein At5g61370, mitochondrial 
 bna-r.1   106348743   EKC/KEOPS complex subunit TP53RK 
 cit-r.1   102629012   uncharacterized LOC102629012 
 cit-r.1   102625606   pentatricopeptide repeat-containing protein At5g61370, mitochondrial 
 gma-u.5   100814450   pentatricopeptide repeat-containing protein At5g61370, mitochondrial 
 gma-u.5   100813383   TP53-regulating kinase-like 
 gma-u.5   100782376   TP53-regulating kinase-like 
 vvi-u.5   100852781   uncharacterized LOC100852781 
 vvi-u.5   100853947   pentatricopeptide repeat-containing protein At5g61370, mitochondrial 
 ppo-u.5   7464693   uncharacterized LOC7464693 
 ppo-u.5   7480688   uncharacterized LOC7480688 
 mtr-u.5   25497770   pentatricopeptide repeat-containing protein At5g61370, mitochondrial 
 mtr-u.5   25493839   pentatricopeptide repeat-containing protein At5g61370, mitochondrial 
 mtr-u.5   25490993   EKC/KEOPS complex subunit TP53RK 
 sly-u.5   101255414   probable serine/threonine-protein kinase BUD32 homolog 
 sly-u.5   101262835   uncharacterized LOC101262835 
 sot-r.1   102594018   EKC/KEOPS complex subunit bud32-like 
 sot-r.1   102592570   EKC/KEOPS complex subunit bud32-like 
 nta-r.1   107785935   uncharacterized LOC107785935 
 nta-r.1   107785571   uncharacterized LOC107785571 
 nta-r.1   107775596   uncharacterized LOC107775596 
 osa-u.5   4348657   uncharacterized LOC4348657 
 zma-u.5   100502223   EKC/KEOPS complex subunit Tp53rk 
 tae-r.2   123071616   EKC/KEOPS complex subunit bud32 
 tae-r.2   123079956   EKC/KEOPS complex subunit bud32 
 tae-r.2   123062794   EKC/KEOPS complex subunit bud32 
 hvu-r.1   123444747   EKC/KEOPS complex subunit bud32 
 sbi-r.1   8059455   EKC/KEOPS complex subunit bud32 
 bdi-r.1   100846600   EKC/KEOPS complex subunit bud32 
 cre-r.1   CHLRE_06g306800v5   uncharacterized protein 

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Top 50 coexpressed genes to 107942515 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107942515 (ghi-r.1 coexpression data)

CoexMap"107942515"


ghiLOC107942515 | Entrez gene ID : 107942515    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 2 2 3 2 2 3 2 2 3 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016731688.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 2,  cyto_mito 1,  nucl 1  (predict for XP_016731688.2)
Subcellular
localization
TargetP
mito 6  (predict for XP_016731688.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107942515
ghi-r.1
for
107930577
ghi-r.1
for
107951264
ghi-r.1
for
107931522
ath-u.5
for
AT5G26110
ath-u.5
for
AT5G61370
bra-r.6
for
103860588
bna-r.1
for
106428055
bna-r.1
for
106348743
cit-r.1
for
102629012
cit-r.1
for
102625606
gma-u.5
for
100814450
gma-u.5
for
100813383
gma-u.5
for
100782376
vvi-u.5
for
100852781
vvi-u.5
for
100853947
ppo-u.5
for
7464693
ppo-u.5
for
7480688
mtr-u.5
for
25497770
mtr-u.5
for
25493839
mtr-u.5
for
25490993
sly-u.5
for
101255414
sly-u.5
for
101262835
sot-r.1
for
102594018
sot-r.1
for
102592570
nta-r.1
for
107785935
nta-r.1
for
107785571
nta-r.1
for
107775596
osa-u.5
for
4348657
zma-u.5
for
100502223
tae-r.2
for
123071616
tae-r.2
for
123079956
tae-r.2
for
123062794
hvu-r.1
for
123444747
sbi-r.1
for
8059455
bdi-r.1
for
100846600
cre-r.1
for
CHLRE_06g306800v5


Ortholog ID: 3842
Species ghi ghi ghi ath ath bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107942515 LOC107951264 LOC107931522 AT5G26110 AT5G61370 LOC103860588 LOC106428055 LOC106348564 LOC125575259 LOC102629012 LOC102625606 LOC100814450 LOC100813383 LOC100782376 LOC100852781 LOC100853947 LOC7464693 LOC7480688 LOC25497770 LOC25493839 LOC25490993 LOC101255414 LOC101262835 LOC102594018 LOC102592570 LOC107785571 LOC107775596 LOC107781486 LOC4348657 LOC100502223 LOC123071616 LOC123079956 LOC123062794 LOC123444747 LOC8059455 LOC100846600 CHLRE_06g306800v5
Function* pentatricopeptide repeat-containing protein At5g61370, mitochondrial pentatricopeptide repeat-containing protein At5g61370, mitochondrial EKC/KEOPS complex subunit TP53RK Protein kinase superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g61370, mitochondrial pentatricopeptide repeat-containing protein At5g61370, mitochondrial EKC/KEOPS complex subunit TP53RK-like pentatricopeptide repeat-containing protein At5g61370, mitochondrial-like uncharacterized LOC102629012 pentatricopeptide repeat-containing protein At5g61370, mitochondrial pentatricopeptide repeat-containing protein At5g61370, mitochondrial TP53-regulating kinase-like TP53-regulating kinase-like uncharacterized LOC100852781 pentatricopeptide repeat-containing protein At5g61370, mitochondrial uncharacterized LOC7464693 uncharacterized LOC7480688 pentatricopeptide repeat-containing protein At5g61370, mitochondrial pentatricopeptide repeat-containing protein At5g61370, mitochondrial EKC/KEOPS complex subunit TP53RK probable serine/threonine-protein kinase BUD32 homolog uncharacterized LOC101262835 EKC/KEOPS complex subunit bud32-like EKC/KEOPS complex subunit bud32-like uncharacterized LOC107785571 uncharacterized LOC107775596 uncharacterized LOC107781486 uncharacterized LOC4348657 EKC/KEOPS complex subunit Tp53rk EKC/KEOPS complex subunit bud32 EKC/KEOPS complex subunit bud32 EKC/KEOPS complex subunit bud32 EKC/KEOPS complex subunit bud32 EKC/KEOPS complex subunit bud32 EKC/KEOPS complex subunit bud32 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr00770 Pantothenate and CoA biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 6
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04146 Peroxisome 2
sly01240 Biosynthesis of cofactors 2
sly03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 4
sot03420 Nucleotide excision repair 3
sot03082 ATP-dependent chromatin remodeling 2
sot00230 Purine metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 3
sot03082 ATP-dependent chromatin remodeling 2
sot00470 D-Amino acid metabolism 2
sot00230 Purine metabolism 2
sot00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta04120 Ubiquitin mediated proteolysis 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 5
tae03008 Ribosome biogenesis in eukaryotes 3
tae04712 Circadian rhythm - plant 3
tae04382 Cornified envelope formation 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae00970 Aminoacyl-tRNA biosynthesis 4
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 5
tae03008 Ribosome biogenesis in eukaryotes 3
tae04712 Circadian rhythm - plant 3
tae04382 Cornified envelope formation 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107942515 107951264 107931522 832680 836258 103860588 106428055 106348564 125575259 102629012 102625606 100814450 100813383 100782376 100852781 100853947 7464693 7480688 25497770 25493839 25490993 101255414 101262835 102594018 102592570 107785571 107775596 107781486 4348657 100502223 123071616 123079956 123062794 123444747 8059455 100846600 5716870
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