ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107943665	zinc finger Ran-binding domain-containing protein 2
ath-u.5	AT3G15680	Ran BP2/NZF zinc finger-like superfamily protein
ath-u.5	AT5G25490	Ran BP2/NZF zinc finger-like superfamily protein
gma-u.5	100811107	transcription initiation factor TFIID subunit 15
gma-u.5	100799240	TATA-binding protein-associated factor 2N
gma-u.5	100527535	uncharacterized LOC100527535
vvi-u.5	100248007	uncharacterized LOC100248007
vvi-u.5	100268075	uncharacterized LOC100268075
ppo-u.5	7490961	uncharacterized LOC7490961
ppo-u.5	7462978	uncharacterized LOC7462978
ppo-u.5	7475713	uncharacterized LOC7475713
mtr-u.5	25491332	zinc finger Ran-binding domain-containing protein 2
mtr-u.5	11431968	uncharacterized RNA-binding protein C17H9.04c
sly-u.5	101265154	RNA-binding protein involved in heterochromatin assembly dri1
osa-u.5	4340075	RNA-binding protein involved in heterochromatin assembly dri1
osa-u.5	4328666	uncharacterized LOC4328666
zma-u.5	100194201	uncharacterized LOC100194201
zma-u.5	606475	uncharacterized LOC606475
zma-u.5	100277313	uncharacterized LOC100277313

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005737 [list] [network] cytoplasm

(13864 genes)

IEA

GO MF

GO:0003729 [list] [network] mRNA binding

(890 genes)

IEA

Protein

XP_040968650.1 [sequence] [blastp]
XP_040968651.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 2, extr 2, cysk_nucl 2, nucl_plas 2	(predict for XP_040968650.1)
nucl 4, cyto 2, extr 2, cysk_nucl 2, nucl_plas 2	(predict for XP_040968651.1)

Subcellular
localization
TargetP

mito 6, other 3	(predict for XP_040968650.1)
mito 6, other 3	(predict for XP_040968651.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107943665	ath-u.5 for AT3G15680	ath-u.5 for AT5G25490	gma-u.5 for 100811107	gma-u.5 for 100799240	gma-u.5 for 100527535	vvi-u.5 for 100248007	vvi-u.5 for 100268075	ppo-u.5 for 7490961	ppo-u.5 for 7462978	ppo-u.5 for 7475713	mtr-u.5 for 25491332	mtr-u.5 for 11431968	sly-u.5 for 101265154	osa-u.5 for 4340075	osa-u.5 for 4328666	zma-u.5 for 100194201	zma-u.5 for 606475	zma-u.5 for 100277313

Ortholog

Ortholog ID: 2903

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

zinc finger Ran-binding domain-containing protein 2

Ran BP2/NZF zinc finger-like superfamily protein

RNA-binding protein cabeza

uncharacterized RNA-binding protein C17H9.04c

transcription initiation factor TFIID subunit 15b-like

uncharacterized LOC102612282

transcription initiation factor TFIID subunit 15

TATA-binding protein-associated factor 2N

transcription initiation factor TFIID subunit 15

uncharacterized LOC100268075

uncharacterized LOC100248007

uncharacterized LOC7475713

uncharacterized LOC7462978

uncharacterized RNA-binding protein C17H9.04c

zinc finger Ran-binding domain-containing protein 2

RNA-binding protein involved in heterochromatin assembly dri1

uncharacterized RNA-binding protein C17H9.04c

RNA-binding protein involved in heterochromatin assembly dri1

uncharacterized LOC4328666

uncharacterized LOC606475

uncharacterized LOC100277313

uncharacterized RNA-binding protein C17H9.04c

zinc finger Ran-binding domain-containing protein 2

uncharacterized RNA-binding protein C17H9.04c-like

RNA-binding protein cabeza

uncharacterized RNA-binding protein C17H9.04c

TATA-binding protein-associated factor 2N

uncharacterized RNA-binding protein C17H9.04c

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	2
vvi04517	IgSF CAM signaling	2
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	6
osa03013	Nucleocytoplasmic transport	3
osa03015	mRNA surveillance pathway	3
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00760	Nicotinate and nicotinamide metabolism	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	2

Expression

Expression pattern

Entrez Gene ID^*

121229345

107937363

820811

832624

103840565

103874408

106387497

102612282

102613403

100799240

100811107

100268075

100248007

7475713

7462978

11431968

25491332

101265154

102594174

107812132

107763007

4340075

4328666

606475

100277313

123149383

123164270

123407636

123403388

110434870

8068430

100843780

100824932

66052090

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107943665 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107943665 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	sot	nta	cre	tae
Paralog	1	2	3	2	3	2	1	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107943665 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107943665 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**