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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107945029   40S ribosomal protein S25-2 
 ghi-r.1   107927820   40S ribosomal protein S25-4 
 ghi-r.1   107949103   40S ribosomal protein S25-4 
 ghi-r.1   107942425   40S ribosomal protein S25-2 
 ath-u.5   AT4G39200   Ribosomal protein S25 family protein 
 ath-u.5   AT2G21580   Ribosomal protein S25 family protein 
 bra-r.6   103842511   40S ribosomal protein S25-4 
 bra-r.6   103835133   40S ribosomal protein S25-4 
 bra-r.6   103828059   40S ribosomal protein S25-4 
 bna-r.1   106365970   40S ribosomal protein S25-4 
 bna-r.1   106439850   40S ribosomal protein S25-3 
 bna-r.1   106406029   40S ribosomal protein S25-3 
 cit-r.1   102620206   40S ribosomal protein S25-3 
 cit-r.1   102629500   40S ribosomal protein S25-2 
 gma-u.5   100786842   40S ribosomal protein S25-2 
 gma-u.5   100499810   uncharacterized LOC100499810 
 gma-u.5   100789867   40S ribosomal protein S25 
 vvi-u.5   100265344   small ribosomal subunit protein eS25 
 vvi-u.5   100258834   40S ribosomal protein S25-4-like 
 vvi-u.5   100249356   small ribosomal subunit protein eS25 
 ppo-u.5   7464019   40S ribosomal protein S25 
 ppo-u.5   7490893   40S ribosomal protein S25 
 ppo-u.5   7491621   40S ribosomal protein S25 
 mtr-u.5   11406592   40S ribosomal protein S25-2 
 mtr-u.5   11416848   40S ribosomal protein S25-2 
 sly-u.5   RPS25   ribosomal protein S25 
 sly-u.5   101261290   ribosomal protein S25 
 sot-r.1   102600827   40S ribosomal protein S25-2 
 sot-r.1   102584409   40S ribosomal protein S25 
 nta-r.1   107807859   small ribosomal subunit protein eS25 
 nta-r.1   107815372   small ribosomal subunit protein eS25 
 nta-r.1   107768022   small ribosomal subunit protein eS25 
 osa-u.5   4347899   40S ribosomal protein S25-2 
 osa-u.5   4346314   small ribosomal subunit protein eS25y 
 osa-u.5   4349810   small ribosomal subunit protein eS25 
 zma-u.5   100281626   40S ribosomal protein S25-1 
 zma-u.5   100283674   40S ribosomal protein S25-like 
 zma-u.5   100193720   40S ribosomal protein S25-1 
 tae-r.2   123149415   40S ribosomal protein S25-2 
 hvu-r.1   123446838   40S ribosomal protein S25-2 
 sbi-r.1   8057717   40S ribosomal protein S25-4 
 sbi-r.1   8082383   40S ribosomal protein S25-4 
 sbi-r.1   8082384   40S ribosomal protein S25-2 
 bdi-r.1   100827698   40S ribosomal protein S25-2 
 bdi-r.1   100833253   40S ribosomal protein S25-2 
 bdi-r.1   100829243   40S ribosomal protein S25-2 
 cre-r.1   CHLRE_08g382500v5   ribosomal protein S25 

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Top 50 coexpressed genes to 107945029 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107945029 (ghi-r.1 coexpression data)

CoexMap"107945029"


ghiLOC107945029 | Entrez gene ID : 107945029    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 2 3 3 3 2 2 2 3 3 3 1 1 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (268 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016734333.1 [sequence] [blastp]
XP_016734334.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  mito 1,  golg 1  (predict for XP_016734333.1)
nucl 9,  mito 1,  golg 1  (predict for XP_016734334.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016734333.1)
other 9  (predict for XP_016734334.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107945029
ghi-r.1
for
107927820
ghi-r.1
for
107949103
ghi-r.1
for
107942425
ath-u.5
for
AT4G39200
ath-u.5
for
AT2G21580
bra-r.6
for
103842511
bra-r.6
for
103835133
bra-r.6
for
103828059
bna-r.1
for
106365970
bna-r.1
for
106439850
bna-r.1
for
106406029
cit-r.1
for
102620206
cit-r.1
for
102629500
gma-u.5
for
100786842
gma-u.5
for
100499810
gma-u.5
for
100789867
vvi-u.5
for
100265344
vvi-u.5
for
100258834
vvi-u.5
for
100249356
ppo-u.5
for
7464019
ppo-u.5
for
7490893
ppo-u.5
for
7491621
mtr-u.5
for
11406592
mtr-u.5
for
11416848
sly-u.5
for
RPS25
sly-u.5
for
101261290
sot-r.1
for
102600827
sot-r.1
for
102584409
nta-r.1
for
107807859
nta-r.1
for
107815372
nta-r.1
for
107768022
osa-u.5
for
4347899
osa-u.5
for
4346314
osa-u.5
for
4349810
zma-u.5
for
100281626
zma-u.5
for
100283674
zma-u.5
for
100193720
tae-r.2
for
123149415
hvu-r.1
for
123446838
sbi-r.1
for
8057717
sbi-r.1
for
8082383
sbi-r.1
for
8082384
bdi-r.1
for
100827698
bdi-r.1
for
100833253
bdi-r.1
for
100829243
cre-r.1
for
CHLRE_08g382500v5


Ortholog ID: 1333
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa osa zma zma zma hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC107927820 LOC107949103 LOC107942425 AT4G39200 AT2G21580 LOC103842511 LOC103828059 LOC103834204 LOC106365970 LOC106410768 LOC106438930 LOC102620206 LOC102629500 LOC100786842 LOC100499810 LOC100789867 LOC100265344 LOC100258834 LOC100249356 LOC7464019 LOC7490893 LOC7491621 LOC11406592 LOC11416848 RPS25 LOC101261290 LOC102600827 LOC102584409 LOC107807859 LOC107815372 LOC107787568 LOC4347899 LOC4346314 LOC4349810 LOC100281626 LOC100283674 LOC100193720 LOC123446838 LOC123446840 LOC8057717 LOC8082383 LOC8082384 LOC100827698 LOC100833253 LOC100829243 CHLRE_08g382500v5
Function* 40S ribosomal protein S25-4 40S ribosomal protein S25-4 40S ribosomal protein S25-2 Ribosomal protein S25 family protein Ribosomal protein S25 family protein 40S ribosomal protein S25-4 40S ribosomal protein S25-4 40S ribosomal protein S25-4 40S ribosomal protein S25-4 40S ribosomal protein S25-4 40S ribosomal protein S25-4 40S ribosomal protein S25-3 40S ribosomal protein S25-2 40S ribosomal protein S25-2 uncharacterized LOC100499810 40S ribosomal protein S25 small ribosomal subunit protein eS25 40S ribosomal protein S25-4-like small ribosomal subunit protein eS25 40S ribosomal protein S25 40S ribosomal protein S25 40S ribosomal protein S25 40S ribosomal protein S25-2 40S ribosomal protein S25-2 ribosomal protein S25 ribosomal protein S25 40S ribosomal protein S25-2 40S ribosomal protein S25 small ribosomal subunit protein eS25 small ribosomal subunit protein eS25 small ribosomal subunit protein eS25 40S ribosomal protein S25-2 small ribosomal subunit protein eS25y small ribosomal subunit protein eS25 40S ribosomal protein S25-1 40S ribosomal protein S25-like 40S ribosomal protein S25-1 40S ribosomal protein S25-2 40S ribosomal protein S25-2 40S ribosomal protein S25-4 40S ribosomal protein S25-4 40S ribosomal protein S25-2 40S ribosomal protein S25-2 40S ribosomal protein S25-2 40S ribosomal protein S25-2 ribosomal protein S25
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
vvi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107927820 107949103 107942425 830075 816696 103842511 103828059 103834204 106365970 106410768 106438930 102620206 102629500 100786842 100499810 100789867 100265344 100258834 100249356 7464019 7490893 7491621 11406592 11416848 544096 101261290 102600827 102584409 107807859 107815372 107787568 4347899 4346314 4349810 100281626 100283674 100193720 123446838 123446840 8057717 8082383 8082384 100827698 100833253 100829243 5719839
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