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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107946397   26S proteasome non-ATPase regulatory subunit 11 homolog 
 ghi-r.1   107920294   26S proteasome non-ATPase regulatory subunit 11 homolog 
 ghi-r.1   107919956   26S proteasome non-ATPase regulatory subunit 11 homolog 
 ghi-r.1   107898730   26S proteasome non-ATPase regulatory subunit 11 homolog 
 ath-u.5   ATS9   non-ATPase subunit 9 
 bra-r.6   103840516   26S proteasome non-ATPase regulatory subunit 11 homolog 
 bra-r.6   103835296   26S proteasome non-ATPase regulatory subunit 11 homolog 
 bna-r.1   106361662   26S proteasome non-ATPase regulatory subunit 11 homolog 
 bna-r.1   125577124   26S proteasome non-ATPase regulatory subunit 11 homolog 
 bna-r.1   106401706   26S proteasome non-ATPase regulatory subunit 11 homolog 
 cit-r.1   102607829   26S proteasome non-ATPase regulatory subunit 11 homolog 
 gma-u.5   100796188   26S proteasome non-ATPase regulatory subunit 11 homolog 
 gma-u.5   100780845   26S proteasome non-ATPase regulatory subunit 11 homolog 
 gma-u.5   100777365   26S proteasome non-ATPase regulatory subunit 11 homolog 
 vvi-u.5   100252303   26S proteasome non-ATPase regulatory subunit 11-like 
 vvi-u.5   100260524   26S proteasome non-ATPase regulatory subunit 11-like 
 ppo-u.5   7481558   26S proteasome non-ATPase regulatory subunit 11 homolog 
 ppo-u.5   7473282   26S proteasome non-ATPase regulatory subunit 11 homolog 
 ppo-u.5   7457878   26S proteasome non-ATPase regulatory subunit 11 homolog 
 mtr-u.5   11425675   26S proteasome non-ATPase regulatory subunit 11 homolog 
 mtr-u.5   11436093   26S proteasome non-ATPase regulatory subunit 11 homolog 
 sly-u.5   101258750   26S proteasome non-ATPase regulatory subunit 11 homolog 
 sot-r.1   102584171   26S proteasome non-ATPase regulatory subunit 11 homolog 
 nta-r.1   107815473   26S proteasome non-ATPase regulatory subunit 11 homolog 
 nta-r.1   107807364   26S proteasome non-ATPase regulatory subunit 11 homolog 
 nta-r.1   107805482   26S proteasome non-ATPase regulatory subunit 11 homolog 
 osa-u.5   4335951   26S proteasome non-ATPase regulatory subunit 11 homolog 
 zma-u.5   100284700   uncharacterized LOC100284700 
 zma-u.5   100193485   26S proteasome non-ATPase regulatory subunit 11-like protein 
 zma-u.5   111589223   26S proteasome non-ATPase regulatory subunit 11 homolog 
 tae-r.2   123099054   26S proteasome non-ATPase regulatory subunit 11 homolog 
 tae-r.2   123053407   26S proteasome non-ATPase regulatory subunit 11 homolog 
 tae-r.2   123189315   26S proteasome non-ATPase regulatory subunit 11 homolog 
 hvu-r.1   123449917   26S proteasome non-ATPase regulatory subunit 11 homolog 
 hvu-r.1   123426812   26S proteasome non-ATPase regulatory subunit 11 homolog 
 hvu-r.1   123426381   26S proteasome non-ATPase regulatory subunit 11 homolog 
 sbi-r.1   8080357   26S proteasome non-ATPase regulatory subunit 11 homolog 
 sbi-r.1   8070126   26S proteasome non-ATPase regulatory subunit 11 homolog 
 bdi-r.1   100826401   26S proteasome non-ATPase regulatory subunit 11 homolog 
 bdi-r.1   100826582   26S proteasome non-ATPase regulatory subunit 11 homolog 
 cre-r.1   CHLRE_02g097650v5   uncharacterized protein 

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Top 50 coexpressed genes to 107946397 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107946397 (ghi-r.1 coexpression data)

CoexMap"107946397"


ghiLOC107946397 | Entrez gene ID : 107946397    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 3 2 3 2 1 1 3 1 3 3 3 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03050 [list] [network] Proteasome (162 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (782 genes)  IEA  
GO CC
GO:0008541 [list] [network] proteasome regulatory particle, lid subcomplex  (32 genes)  IEA  
GO MF
GO:0005198 [list] [network] structural molecule activity  (1439 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016736191.1 [sequence] [blastp]
XP_016736192.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 3,  plas 2,  cyto_nucl 2  (predict for XP_016736191.1)
chlo 3,  nucl 3,  plas 2,  cyto_nucl 2  (predict for XP_016736192.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_016736191.1)
other 6,  chlo 3  (predict for XP_016736192.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107946397
ghi-r.1
for
107920294
ghi-r.1
for
107919956
ghi-r.1
for
107898730
ath-u.5
for
ATS9
bra-r.6
for
103840516
bra-r.6
for
103835296
bna-r.1
for
106361662
bna-r.1
for
125577124
bna-r.1
for
106401706
cit-r.1
for
102607829
gma-u.5
for
100796188
gma-u.5
for
100780845
gma-u.5
for
100777365
vvi-u.5
for
100252303
vvi-u.5
for
100260524
ppo-u.5
for
7481558
ppo-u.5
for
7473282
ppo-u.5
for
7457878
mtr-u.5
for
11425675
mtr-u.5
for
11436093
sly-u.5
for
101258750
sot-r.1
for
102584171
nta-r.1
for
107815473
nta-r.1
for
107807364
nta-r.1
for
107805482
osa-u.5
for
4335951
zma-u.5
for
100284700
zma-u.5
for
100193485
zma-u.5
for
111589223
tae-r.2
for
123099054
tae-r.2
for
123053407
tae-r.2
for
123189315
hvu-r.1
for
123449917
hvu-r.1
for
123426812
hvu-r.1
for
123426381
sbi-r.1
for
8080357
sbi-r.1
for
8070126
bdi-r.1
for
100826401
bdi-r.1
for
100826582
cre-r.1
for
CHLRE_02g097650v5


Ortholog ID: 3524
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sot nta nta nta osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi cre
Symbol LOC107946397 LOC107919956 LOC107898730 ATS9 LOC103840516 LOC103835296 LOC106361662 LOC125577124 LOC111204689 LOC102607829 LOC100796188 LOC100780845 LOC100777365 LOC100252303 LOC100260524 LOC7481558 LOC7473282 LOC7457878 LOC11425675 LOC11436093 LOC101258750 LOC102584171 LOC107815473 LOC107807364 LOC107805482 LOC4335951 LOC100284700 LOC100193485 LOC111589223 LOC123189315 LOC123188798 LOC123045154 LOC123449917 LOC123426812 LOC123426381 LOC8080357 LOC8070126 LOC100826401 LOC100826582 CHLRE_02g097650v5
Function* 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog non-ATPase subunit 9 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11-like 26S proteasome non-ATPase regulatory subunit 11-like 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog uncharacterized LOC100284700 26S proteasome non-ATPase regulatory subunit 11-like protein 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog 26S proteasome non-ATPase regulatory subunit 11 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 8
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 7
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 7
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 11
ath00010 Glycolysis / Gluconeogenesis 4
ath01200 Carbon metabolism 4
ath01230 Biosynthesis of amino acids 4
ath00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 9
bra04141 Protein processing in endoplasmic reticulum 3
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 12
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 3
bra03040 Spliceosome 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 12
bna03008 Ribosome biogenesis in eukaryotes 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 11
bna03040 Spliceosome 4
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 11
bna03040 Spliceosome 4
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit00030 Pentose phosphate pathway 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 8
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 7
gma03040 Spliceosome 3
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 8
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 8
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 6
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 8
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 4
mtr03015 mRNA surveillance pathway 3
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03083 Polycomb repressive complex 2
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 7
nta04141 Protein processing in endoplasmic reticulum 3
nta00100 Steroid biosynthesis 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 8
nta04141 Protein processing in endoplasmic reticulum 4
nta00100 Steroid biosynthesis 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 8
nta04141 Protein processing in endoplasmic reticulum 3
nta00100 Steroid biosynthesis 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 3
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 7
tae03015 mRNA surveillance pathway 4
tae04382 Cornified envelope formation 4
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 12
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi03050 Proteasome 4
sbi00020 Citrate cycle (TCA cycle) 3
sbi00785 Lipoic acid metabolism 3
sbi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 7
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107946397 107919956 107898730 839789 103840516 103835296 106361662 125577124 111204689 102607829 100796188 100780845 100777365 100252303 100260524 7481558 7473282 7457878 11425675 11436093 101258750 102584171 107815473 107807364 107805482 4335951 100284700 100193485 111589223 123189315 123188798 123045154 123449917 123426812 123426381 8080357 8070126 100826401 100826582 5725592
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