ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107946417	uncharacterized LOC107946417
ghi-r.1	107886365	uncharacterized LOC107886365
ghi-r.1	107894077	uncharacterized LOC107894077
ghi-r.1	107898483	uncharacterized LOC107898483
ath-u.5	AT1G04960	golgin family A protein (DUF1664)
ath-u.5	AT1G27000	GRIP/coiled-coil protein, putative (DUF1664)
ath-u.5	AT2G02730	GRIP/coiled-coil protein, putative (DUF1664)
bra-r.6	103844195	uncharacterized LOC103844195
bra-r.6	103840670	uncharacterized LOC103840670
bra-r.6	103839440	uncharacterized LOC103839440
bna-r.1	106416639	uncharacterized LOC106416639
bna-r.1	106397541	uncharacterized LOC106397541
bna-r.1	BNAC05G02970D	uncharacterized BNAC05G02970D
cit-r.1	102629348	uncharacterized LOC102629348
cit-r.1	102621410	uncharacterized LOC102621410
cit-r.1	102610706	uncharacterized LOC102610706
gma-u.5	100803530	uncharacterized LOC100803530
gma-u.5	BZIP55	bZIP transcription factor 55
gma-u.5	BZIP108	putative bZIP domain class transcription factor
vvi-u.5	100261969	uncharacterized LOC100261969
vvi-u.5	100246806	uncharacterized LOC100246806
vvi-u.5	100248973	uncharacterized LOC100248973
ppo-u.5	7481210	uncharacterized LOC7481210
ppo-u.5	7474230	uncharacterized LOC7474230
ppo-u.5	7460559	uncharacterized LOC7460559
mtr-u.5	11429061	uncharacterized LOC11429061
mtr-u.5	11446825	uncharacterized LOC11446825
mtr-u.5	11419070	uncharacterized LOC11419070
sly-u.5	101265351	uncharacterized LOC101265351
sly-u.5	101250989	uncharacterized LOC101250989
sly-u.5	101248698	uncharacterized LOC101248698
sot-r.1	102580510	uncharacterized LOC102580510
sot-r.1	102602238	uncharacterized LOC102602238
sot-r.1	102584187	uncharacterized LOC102584187
nta-r.1	107814121	uncharacterized LOC107814121
nta-r.1	107828591	uncharacterized LOC107828591
nta-r.1	107759468	uncharacterized LOC107759468
osa-u.5	4337995	uncharacterized LOC4337995
osa-u.5	4337544	uncharacterized LOC4337544
zma-u.5	100276494	uncharacterized LOC100276494
zma-u.5	100383213	putative DUF1664 domain family protein
tae-r.2	123040939	uncharacterized LOC123040939
tae-r.2	123115169	uncharacterized LOC123115169
hvu-r.1	123399310	uncharacterized LOC123399310
hvu-r.1	123427139	uncharacterized LOC123427139
sbi-r.1	8066588	uncharacterized LOC8066588
sbi-r.1	110430323	uncharacterized LOC110430323
bdi-r.1	100835843	uncharacterized LOC100835843
bdi-r.1	100836333	uncharacterized LOC100836333
cre-r.1	CHLRE_16g668350v5	uncharacterized protein

Top 50 coexpressed genes to 107946417 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107946417 (ghi-r.1 coexpression data)

CoexMap"107946417"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016736215.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 3, cyto_E.R. 2, cysk 1, chlo 1, extr 1, cysk_plas 1

(predict for XP_016736215.1)

Subcellular
localization
TargetP

scret 7

(predict for XP_016736215.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107946417	ghi-r.1 for 107886365	ghi-r.1 for 107894077	ghi-r.1 for 107898483	ath-u.5 for AT1G04960	ath-u.5 for AT1G27000	ath-u.5 for AT2G02730	bra-r.6 for 103844195	bra-r.6 for 103840670	bra-r.6 for 103839440	bna-r.1 for 106416639	bna-r.1 for 106397541	bna-r.1 for BNAC05G02970D	cit-r.1 for 102629348	cit-r.1 for 102621410	cit-r.1 for 102610706	gma-u.5 for 100803530	gma-u.5 for BZIP55	gma-u.5 for BZIP108	vvi-u.5 for 100261969	vvi-u.5 for 100246806	vvi-u.5 for 100248973	ppo-u.5 for 7481210	ppo-u.5 for 7474230	ppo-u.5 for 7460559	mtr-u.5 for 11429061	mtr-u.5 for 11446825	mtr-u.5 for 11419070	sly-u.5 for 101265351	sly-u.5 for 101250989	sly-u.5 for 101248698	sot-r.1 for 102580510	sot-r.1 for 102602238	sot-r.1 for 102584187	nta-r.1 for 107814121	nta-r.1 for 107828591	nta-r.1 for 107759468	osa-u.5 for 4337995	osa-u.5 for 4337544	zma-u.5 for 100276494	zma-u.5 for 100383213	tae-r.2 for 123040939	tae-r.2 for 123115169	hvu-r.1 for 123399310	hvu-r.1 for 123427139	sbi-r.1 for 8066588	sbi-r.1 for 110430323	bdi-r.1 for 100835843	bdi-r.1 for 100836333	cre-r.1 for CHLRE_16g668350v5

Ortholog

Ortholog ID: 637

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

BZIP55

BZIP108

BZIP109

Function^*

uncharacterized LOC107886365

uncharacterized LOC107922735

uncharacterized LOC121228291

GRIP/coiled-coil protein, putative (DUF1664)

bZIP transcription factor, putative (DUF1664)

uncharacterized LOC103835413

uncharacterized LOC106367517

uncharacterized LOC106430467

uncharacterized LOC102629348

uncharacterized LOC102621410

uncharacterized LOC102610706

bZIP transcription factor 55

putative bZIP domain class transcription factor

bZIP transcription factor bZIP109

uncharacterized LOC100261969

uncharacterized LOC100246806

uncharacterized LOC100248973

uncharacterized LOC7481210

uncharacterized LOC7474230

uncharacterized LOC7471497

uncharacterized LOC11429061

uncharacterized LOC11446825

uncharacterized LOC11419070

uncharacterized LOC101265351

uncharacterized LOC101250989

uncharacterized LOC101248698

uncharacterized LOC102580510

uncharacterized LOC102584187

uncharacterized LOC102597742

uncharacterized LOC107805499

uncharacterized LOC107790180

uncharacterized LOC107760190

uncharacterized LOC4337995

uncharacterized LOC4326458

uncharacterized LOC9271634

uncharacterized LOC100276494

uncharacterized LOC123060231

uncharacterized LOC123068728

uncharacterized LOC123427139

uncharacterized LOC123442763

uncharacterized LOC8066588

uncharacterized LOC110432858

uncharacterized LOC8085064

uncharacterized LOC100835843

uncharacterized LOC100845945

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00540	Lipopolysaccharide biosynthesis	2
ghi03040	Spliceosome	2
ghi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	4
ghi04141	Protein processing in endoplasmic reticulum	3
ghi04144	Endocytosis	2
ghi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00510	N-Glycan biosynthesis	4
ghi00513	Various types of N-glycan biosynthesis	4
ghi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	8
ath00020	Citrate cycle (TCA cycle)	7
ath01210	2-Oxocarboxylic acid metabolism	7
ath00010	Glycolysis / Gluconeogenesis	5
ath01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	4
bna04141	Protein processing in endoplasmic reticulum	4
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	5
bna04141	Protein processing in endoplasmic reticulum	5
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03022	Basal transcription factors	2
gma03015	mRNA surveillance pathway	2
gma04136	Autophagy - other	2
gma04382	Cornified envelope formation	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03250	Viral life cycle - HIV-1	2
vvi03272	Virion - Hepatitis viruses	2
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2
mtr04626	Plant-pathogen interaction	2
mtr04016	MAPK signaling pathway - plant	2
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	4
mtr03083	Polycomb repressive complex	2
mtr04120	Ubiquitin mediated proteolysis	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	7
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	7
sot03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00510	N-Glycan biosynthesis	2
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	2
nta00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01240	Biosynthesis of cofactors	3
nta00760	Nicotinate and nicotinamide metabolism	3
nta00010	Glycolysis / Gluconeogenesis	2
nta00053	Ascorbate and aldarate metabolism	2
nta00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03250	Viral life cycle - HIV-1	2
osa04144	Endocytosis	2
osa04120	Ubiquitin mediated proteolysis	2
osa04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	4
hvu00071	Fatty acid degradation	2
hvu01212	Fatty acid metabolism	2
hvu04120	Ubiquitin mediated proteolysis	2
hvu00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04145	Phagosome	5
sbi00190	Oxidative phosphorylation	4
sbi04142	Lysosome	3
sbi00280	Valine, leucine and isoleucine degradation	2
sbi00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	2
bdi04145	Phagosome	2
bdi04148	Efferocytosis	2
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	3
bdi03250	Viral life cycle - HIV-1	2
bdi03272	Virion - Hepatitis viruses	2
bdi04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

107886365

107922735

121228291

839590

839041

839042

103835413

106367517

106430467

102629348

102621410

102610706

778129

780547

778138

100261969

100246806

100248973

7481210

7474230

7471497

11429061

11446825

11419070

101265351

101250989

101248698

102580510

102584187

102597742

107805499

107790180

107760190

4337995

4326458

9271634

100276494

123060231

123068728

123427139

123442763

8066588

110432858

8085064

100835843

100845945

5717410

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	3	3	3	3	3	3	3	2	2	2	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107946417 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107946417 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**