ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107946928	palmitoyl-protein thioesterase 1
ghi-r.1	107945558	palmitoyl-protein thioesterase 1
ghi-r.1	107929689	palmitoyl-protein thioesterase 1
ghi-r.1	107923947	palmitoyl-protein thioesterase 1
ath-u.5	AT3G60340	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT5G47350	alpha/beta-Hydrolases superfamily protein
bra-r.6	103868109	palmitoyl-protein thioesterase 1
bra-r.6	103860915	palmitoyl-protein thioesterase 1
bna-r.1	106418000	palmitoyl-protein thioesterase 3-like
bna-r.1	106405964	palmitoyl-protein thioesterase 3-like
cit-r.1	102616100	uncharacterized LOC102616100
cit-r.1	102630175	uncharacterized LOC102630175
gma-u.5	100818036	palmitoyl-protein thioesterase 1
gma-u.5	100818013	palmitoyl-protein thioesterase 1
gma-u.5	100809770	palmitoyl-protein thioesterase 1
vvi-u.5	100249424	uncharacterized LOC100249424
vvi-u.5	100241128	uncharacterized LOC100241128
ppo-u.5	7453914	uncharacterized LOC7453914
ppo-u.5	18094589	uncharacterized LOC18094589
ppo-u.5	7461990	uncharacterized LOC7461990
mtr-u.5	11430135	palmitoyl-protein thioesterase 1
mtr-u.5	25497457	palmitoyl-protein thioesterase 1
sly-u.5	101260474	uncharacterized LOC101260474
sly-u.5	101264960	uncharacterized LOC101264960
sot-r.1	102602882	palmitoyl-protein thioesterase 1-like
sot-r.1	102594776	palmitoyl-protein thioesterase 1
nta-r.1	107781763	uncharacterized LOC107781763
nta-r.1	107761172	uncharacterized LOC107761172
osa-u.5	4331284	uncharacterized LOC4331284
osa-u.5	4349396	uncharacterized LOC4349396
zma-u.5	100193420	uncharacterized LOC100193420
zma-u.5	100216902	palmitoyl-protein thioesterase 1
tae-r.2	123181670	palmitoyl-protein thioesterase 1
tae-r.2	123052337	palmitoyl-protein thioesterase 1
hvu-r.1	123439274	palmitoyl-protein thioesterase 1-like
hvu-r.1	123450011	palmitoyl-protein thioesterase 1-like
sbi-r.1	8081564	palmitoyl-protein thioesterase 1
sbi-r.1	8058070	palmitoyl-protein thioesterase 1
bdi-r.1	100846454	palmitoyl-protein thioesterase 1
bdi-r.1	100834215	palmitoyl-protein thioesterase 1
cre-r.1	CHLRE_16g678213v5	uncharacterized protein

Top 50 coexpressed genes to 107946928 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107946928 (ghi-r.1 coexpression data)

CoexMap"107946928"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi00062 [list] [network] Fatty acid elongation (77 genes)

ghi01212 [list] [network] Fatty acid metabolism (193 genes)

ghi04142 [list] [network] Lysosome (184 genes)

GO BP

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(14879 genes)

IEA

GO MF

GO:0016790 [list] [network] thiolester hydrolase activity

(94 genes)

IEA

Protein

XP_016736922.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 3, vacu 2, E.R. 2, E.R._vacu 2

(predict for XP_016736922.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_016736922.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107946928	ghi-r.1 for 107945558	ghi-r.1 for 107929689	ghi-r.1 for 107923947	ath-u.5 for AT3G60340	ath-u.5 for AT5G47350	bra-r.6 for 103868109	bra-r.6 for 103860915	bna-r.1 for 106418000	bna-r.1 for 106405964	cit-r.1 for 102616100	cit-r.1 for 102630175	gma-u.5 for 100818036	gma-u.5 for 100818013	gma-u.5 for 100809770	vvi-u.5 for 100249424	vvi-u.5 for 100241128	ppo-u.5 for 7453914	ppo-u.5 for 18094589	ppo-u.5 for 7461990	mtr-u.5 for 11430135	mtr-u.5 for 25497457	sly-u.5 for 101260474	sly-u.5 for 101264960	sot-r.1 for 102602882	sot-r.1 for 102594776	nta-r.1 for 107781763	nta-r.1 for 107761172	osa-u.5 for 4331284	osa-u.5 for 4349396	zma-u.5 for 100193420	zma-u.5 for 100216902	tae-r.2 for 123181670	tae-r.2 for 123052337	hvu-r.1 for 123439274	hvu-r.1 for 123450011	sbi-r.1 for 8081564	sbi-r.1 for 8058070	bdi-r.1 for 100846454	bdi-r.1 for 100834215	cre-r.1 for CHLRE_16g678213v5

Ortholog

Ortholog ID: 1278

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

palmitoyl-protein thioesterase 1

alpha/beta-Hydrolases superfamily protein

palmitoyl-protein thioesterase 3

palmitoyl-protein thioesterase 3-like

palmitoyl-protein thioesterase 1-like

uncharacterized LOC102616100

uncharacterized LOC102630175

palmitoyl-protein thioesterase 1

uncharacterized LOC100249424

uncharacterized LOC100241128

uncharacterized LOC7453914

uncharacterized LOC18094589

uncharacterized LOC7461990

palmitoyl-protein thioesterase 1

uncharacterized LOC101260474

uncharacterized LOC101264960

palmitoyl-protein thioesterase 1-like

palmitoyl-protein thioesterase 1

uncharacterized LOC107761172

uncharacterized LOC107818009

uncharacterized LOC4331284

uncharacterized LOC4349396

uncharacterized LOC100193420

palmitoyl-protein thioesterase 1

palmitoyl-protein thioesterase 1-like

palmitoyl-protein thioesterase 1

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01240	Biosynthesis of cofactors	6
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	4
ghi00860	Porphyrin metabolism	2
ghi00760	Nicotinate and nicotinamide metabolism	2
ghi00062	Fatty acid elongation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00240	Pyrimidine metabolism	2
ghi01240	Biosynthesis of cofactors	2
ghi00030	Pentose phosphate pathway	2
ghi00710	Carbon fixation by Calvin cycle	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	4
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2
ghi00062	Fatty acid elongation	2
ghi01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00073	Cutin, suberine and wax biosynthesis	3
ath00062	Fatty acid elongation	2
ath01212	Fatty acid metabolism	2
ath04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00062	Fatty acid elongation	2
ath01212	Fatty acid metabolism	2
ath04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01212	Fatty acid metabolism	3
bra00620	Pyruvate metabolism	2
bra00053	Ascorbate and aldarate metabolism	2
bra00062	Fatty acid elongation	2
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00062	Fatty acid elongation	8
bna01212	Fatty acid metabolism	8
bna04142	Lysosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2
bna00062	Fatty acid elongation	2
bna01212	Fatty acid metabolism	2
bna04142	Lysosome	2
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	4
gma03060	Protein export	2
gma00510	N-Glycan biosynthesis	2
gma00513	Various types of N-glycan biosynthesis	2
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00330	Arginine and proline metabolism	2
gma00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00195	Photosynthesis	2
vvi00062	Fatty acid elongation	2
vvi01212	Fatty acid metabolism	2
vvi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00062	Fatty acid elongation	2
vvi01212	Fatty acid metabolism	2
vvi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00941	Flavonoid biosynthesis	5
ppo01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	5
ppo00190	Oxidative phosphorylation	2
ppo04145	Phagosome	2
ppo03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00480	Glutathione metabolism	2
ppo00410	beta-Alanine metabolism	2
ppo01200	Carbon metabolism	2
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00100	Steroid biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00073	Cutin, suberine and wax biosynthesis	6
sot03010	Ribosome	3
sot01240	Biosynthesis of cofactors	2
sot04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	3
nta00062	Fatty acid elongation	2
nta01212	Fatty acid metabolism	2
nta00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00062	Fatty acid elongation	2
nta01212	Fatty acid metabolism	2
nta04142	Lysosome	2
nta00970	Aminoacyl-tRNA biosynthesis	2
nta00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	5
osa00600	Sphingolipid metabolism	3
osa00062	Fatty acid elongation	2
osa01212	Fatty acid metabolism	2
osa04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	4
osa00600	Sphingolipid metabolism	3
osa00520	Amino sugar and nucleotide sugar metabolism	3
osa00062	Fatty acid elongation	2
osa01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	2
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00280	Valine, leucine and isoleucine degradation	3
tae00410	beta-Alanine metabolism	3
tae00640	Propanoate metabolism	3
tae01200	Carbon metabolism	3
tae00062	Fatty acid elongation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00240	Pyrimidine metabolism	3
tae00410	beta-Alanine metabolism	3
tae00770	Pantothenate and CoA biosynthesis	3
tae00062	Fatty acid elongation	2
tae01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3
tae00280	Valine, leucine and isoleucine degradation	3
tae00410	beta-Alanine metabolism	3
tae00640	Propanoate metabolism	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	2
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04130	SNARE interactions in vesicular transport	3
bdi01212	Fatty acid metabolism	3
bdi00061	Fatty acid biosynthesis	2
bdi00071	Fatty acid degradation	2
bdi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	3

Expression

Expression pattern

Entrez Gene ID^*

107946928

107945558

107929689

827459

827458

103848757

103839533

111208229

125576218

102616100

102630175

100818013

100809770

100249424

100241128

7453914

18094589

7461990

11430135

25497457

101260474

101264960

102602882

102594776

107761172

107818009

4331284

4349396

100193420

100216902

123052337

123099169

123128375

123439274

123450011

8081564

8058070

100846454

100834215

5724446

The preparation time of this page was 0.4 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	2	2	3	2	3	2	2	2	2	2	2	2	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107946928 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107946928 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**