ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107947131	uncharacterized LOC107947131
ghi-r.1	107950768	uncharacterized LOC107950768
ghi-r.1	107951176	uncharacterized LOC107951176
ghi-r.1	121203555	uncharacterized LOC121203555
ath-u.5	AT4G23930	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
ath-u.5	AT1G64450	Glycine-rich protein family
bra-r.6	103861549	uncharacterized LOC103861549
bra-r.6	103838166	collagen alpha-1(III) chain
bra-r.6	103861449	uncharacterized LOC103861449
bna-r.1	BNAA03G46360D	uncharacterized BNAA03G46360D
bna-r.1	106416178	uncharacterized LOC106416178
bna-r.1	106407691	uncharacterized LOC106407691
cit-r.1	102630845	uncharacterized LOC102630845
gma-u.5	100820289	uncharacterized LOC100820289
gma-u.5	100812014	uncharacterized LOC100812014
gma-u.5	100782341	uncharacterized LOC100782341
vvi-u.5	100250204	uncharacterized LOC100250204
vvi-u.5	100244412	uncharacterized LOC100244412
ppo-u.5	18094454	uncharacterized LOC18094454
ppo-u.5	7497854	uncharacterized LOC7497854
mtr-u.5	25502199	uncharacterized LOC25502199
mtr-u.5	11432212	uncharacterized LOC11432212
sly-u.5	101253920	uncharacterized LOC101253920
sly-u.5	101253024	uncharacterized LOC101253024
sot-r.1	102583789	uncharacterized LOC102583789
sot-r.1	107059976	uncharacterized LOC107059976
nta-r.1	107827457	uncharacterized LOC107827457
nta-r.1	107782121	uncharacterized LOC107782121
nta-r.1	107760276	uncharacterized LOC107760276
osa-u.5	4338182	uncharacterized LOC4338182
osa-u.5	4324293	uncharacterized LOC4324293
zma-u.5	103635707	Glycine-rich protein family
zma-u.5	100280956	WW domain-binding protein 11
tae-r.2	123069397	basic proline-rich protein-like
tae-r.2	123077893	nascent polypeptide-associated complex subunit alpha, muscle-specific form
tae-r.2	123060821	proline-rich protein 36
hvu-r.1	123443278	basic proline-rich protein-like
sbi-r.1	8078090	ras-associated and pleckstrin homology domains-containing protein 1
sbi-r.1	8058289	uncharacterized LOC8058289
bdi-r.1	100843037	transcription initiation factor TFIID subunit 4
bdi-r.1	100836024	uncharacterized LOC100836024

Top 50 coexpressed genes to 107947131 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107947131 (ghi-r.1 coexpression data)

CoexMap"107947131"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016737183.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 2, extr 2, E.R. 2, mito 1, vacu 1, cyto_E.R. 1

(predict for XP_016737183.2)

Subcellular
localization
TargetP

scret 6

(predict for XP_016737183.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107947131	ghi-r.1 for 107950768	ghi-r.1 for 107951176	ghi-r.1 for 121203555	ath-u.5 for AT4G23930	ath-u.5 for AT1G64450	bra-r.6 for 103861549	bra-r.6 for 103838166	bra-r.6 for 103861449	bna-r.1 for BNAA03G46360D	bna-r.1 for 106416178	bna-r.1 for 106407691	cit-r.1 for 102630845	gma-u.5 for 100820289	gma-u.5 for 100812014	gma-u.5 for 100782341	vvi-u.5 for 100250204	vvi-u.5 for 100244412	ppo-u.5 for 18094454	ppo-u.5 for 7497854	mtr-u.5 for 25502199	mtr-u.5 for 11432212	sly-u.5 for 101253920	sly-u.5 for 101253024	sot-r.1 for 102583789	sot-r.1 for 107059976	nta-r.1 for 107827457	nta-r.1 for 107782121	nta-r.1 for 107760276	osa-u.5 for 4338182	osa-u.5 for 4324293	zma-u.5 for 103635707	zma-u.5 for 100280956	tae-r.2 for 123069397	tae-r.2 for 123077893	tae-r.2 for 123060821	hvu-r.1 for 123443278	sbi-r.1 for 8078090	sbi-r.1 for 8058289	bdi-r.1 for 100843037	bdi-r.1 for 100836024

Ortholog

Ortholog ID: 4108

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107947131

uncharacterized LOC107951176

uncharacterized LOC121203555

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Glycine-rich protein family

uncharacterized LOC103861549

collagen alpha-1(III) chain

uncharacterized LOC103861449

uncharacterized LOC106416178

uncharacterized LOC106407691

collagen alpha-5(IV) chain

uncharacterized LOC102630845

uncharacterized LOC100820289

uncharacterized LOC100782341

uncharacterized LOC100776169

uncharacterized LOC100250204

uncharacterized LOC100244412

uncharacterized LOC18094454

uncharacterized LOC7497854

uncharacterized LOC25502199

uncharacterized LOC11432212

uncharacterized LOC101253920

uncharacterized LOC101253024

uncharacterized LOC102583789

uncharacterized LOC107059976

uncharacterized LOC107827457

uncharacterized LOC107782121

uncharacterized LOC107760276

uncharacterized LOC4338182

uncharacterized LOC4324293

Glycine-rich protein family

WW domain-binding protein 11

basic proline-rich protein-like

nascent polypeptide-associated complex subunit alpha, muscle-specific form

proline-rich protein 36

basic proline-rich protein-like

ras-associated and pleckstrin homology domains-containing protein 1

uncharacterized LOC8058289

transcription initiation factor TFIID subunit 4

uncharacterized LOC100836024

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2
ghi04517	IgSF CAM signaling	2
ghi04518	Integrin signaling	2
ghi04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2
ghi04517	IgSF CAM signaling	2
ghi04518	Integrin signaling	2
ghi04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	5
bra04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	4
bna00941	Flavonoid biosynthesis	4
bna00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	4
bna00941	Flavonoid biosynthesis	4
bna00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00053	Ascorbate and aldarate metabolism	2
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma01240	Biosynthesis of cofactors	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00270	Cysteine and methionine metabolism	5
sot00670	One carbon pool by folate	5
sot00940	Phenylpropanoid biosynthesis	3
sot01230	Biosynthesis of amino acids	3
sot00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04145	Phagosome	2
nta04517	IgSF CAM signaling	2
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2
nta03022	Basal transcription factors	2
nta00030	Pentose phosphate pathway	2
nta00480	Glutathione metabolism	2
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	3

Expression

Expression pattern

Entrez Gene ID^*

107947131

107951176

121203555

828493

842753

103861549

103838166

103861449

106416178

106407691

106366467

102630845

100820289

100782341

100776169

100250204

100244412

18094454

7497854

25502199

11432212

101253920

101253024

102583789

107059976

107827457

107782121

107760276

4338182

4324293

103635707

100280956

123069397

123077893

123060821

123443278

8078090

8058289

100843037

100836024

The preparation time of this page was 0.1 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	3	1	3	2	2	2	2	2	3	2	2	3	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107947131 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107947131 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**